| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0775 |
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| Symbol | |
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| ID | 7971827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 856208 |
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| End bp | 858061 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791373 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002942694 |
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| Protein GI | 239813784 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCAA GCCCCGAGGG TTGTGCCATC TCTTTGCAGA GTAGGGGGAA AGATTTGCCT
ATCGATCAAG CGCGATACGC CCAATGGGCC GCGGCGTGCC GGTTCTCTGC CTTCACCGAC
ACCGCCTACA GCGCGTGGAC ACGCGACGAA GCGTCCCGCC ACAAGGCAGA ACAGCCGGCG
CTTCGCTCTG AGCTGGAGAA TCTTCCGTAC CGCGAGGGCT TGACCTTCGC CATTGCCGAC
AGCGGCAGCG ACGAGGCATT GCACAGCACG CTGGCTTCGC TTTCCGCGCA GCTGTGCCAT
CGCTTCGACG TGGTGGTGGC CTGCGACCCT TCGCGCGCCG AAGCGGTCGG CCATGCGCTC
CTGTTCGTTC GCGATTCGAT CAACGTGCGG CTGGTGCCCG CGGGTGCGCC GGCCAGCCGG
CTCGAACTGC AGCAGCTCGC GCTCGAGCAC ACGGCCGAGC CGTGGTTCGG CGTGATCCTC
GCGGGCGACC GGCTCGCTGC GCAGGCCGTT TCGTCGATCC AGCTCACCCT CGCCAAATGG
CCCGATGCGG CCGTCGCCTA TGCGGACGAG GACTGGATCG CAGAGGGCCA ACTGCGATGC
AAGCCGCGCT TCAAGTCGGC ATGGGATCCG GAGGCGCAGC TCGGCTTCGA CCTGCTGGAC
GGCCTGTGCG TGATGAGGCG CGCCAACGTC CTGGCGGCCG GAGGCTTTCG CGCCGAATTC
GAGCCGGCCG CCGGCTACGA CCTGCACTGC AGGGTGGCCA TGCCGCTGCC CTGCAGCCAG
GTGCGCCATG TTCCCTCGGT GCTGTACCAC CGGCAGGTCC CGCTGGTCAT CGATGCGGGC
GACACGCGGC AGGCCGTCGA GGCCTATGCG GCGGCGGCCC GGCGGGTGGC GGCCGAGGCG
GCGTTCCGGC AGGCGGGCTT GGCGGCCGAG GTGCTGCCCT CGCCGATCGC CGAGTTCGTC
AACCATGTCC GCCGCCCGCT GCCCAGCCCC GCGCCACGGG TCAGCGTGCT CGTGCCGACG
CGCGACCGCG CCAACCTGGT GAGGACCTGC CTGGACGGCC TGCTGCGCAA GACCGACTAT
CCGGACTTCG AAGTCCTCAT CCTCGACAAC GACAGCGTCG AGCCGGCCAC GCTGTCCCTC
TTCGCCGAGT TGGCCGCGGA CCCTCGCGTC AGCGTGCTGC GGGTGCCGGG GCCCTTCAAT
TTTTCGGCCA TCAACAACGC CGGCGTGCAG GCCTCGACCG GCGAGGTGCT GCTCTTCCTG
AACAACGACA TCGAGATCCT CGACGGCGGA TGGCTCAGGG AGATGGTCGG CGAAGCCATG
CGGCCAGACA TCGGCTGCGT GGGCGCGAAG CTGCTGTACG GCGACGGCAC GGTCCAGCAT
GCCGGCGTCA TGCTGCAGAG CGGCCCGCTG GCGATGCATG TGTGCCGCAC CGACAGCGCC
ACCGACACCG GCCTGGACGG GCGGCTGGCC GGCACGCGCG ACTACCTGGC GGTCACGGGC
GCCTGCCTGG CGGTCCGGCG CGCGGTGTTC GAGCAGGTGG GCGGCTTCGA CGGCGAGCAC
CTGCCGGTGG CCTACAACGA CATCGACCTG TGCCTGAAGG TGAACGATGC GGGCTACCGC
AACATCTGCA CGCCGTTCGC CTCGCTGCTG CACCTGGAGA GCGCCTCGCG CGGGCACGAC
CATGTTTCCG AAGAGAAGCA GCAGCGGGCA GCGCGCGAGC AGGCGCATGC CAGCACCAAG
TGGATCGATC GCTTCGAGCA CGACCCCTAT CACAACCCGA ATGTCCAGTG GGACTGGCTC
ACCGGCGCAC ACCTCGCCCC CAACGTCGGC CAGCCCTGGC AGCTCGCGCG CTGA
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| Protein sequence | MPASPEGCAI SLQSRGKDLP IDQARYAQWA AACRFSAFTD TAYSAWTRDE ASRHKAEQPA
LRSELENLPY REGLTFAIAD SGSDEALHST LASLSAQLCH RFDVVVACDP SRAEAVGHAL
LFVRDSINVR LVPAGAPASR LELQQLALEH TAEPWFGVIL AGDRLAAQAV SSIQLTLAKW
PDAAVAYADE DWIAEGQLRC KPRFKSAWDP EAQLGFDLLD GLCVMRRANV LAAGGFRAEF
EPAAGYDLHC RVAMPLPCSQ VRHVPSVLYH RQVPLVIDAG DTRQAVEAYA AAARRVAAEA
AFRQAGLAAE VLPSPIAEFV NHVRRPLPSP APRVSVLVPT RDRANLVRTC LDGLLRKTDY
PDFEVLILDN DSVEPATLSL FAELAADPRV SVLRVPGPFN FSAINNAGVQ ASTGEVLLFL
NNDIEILDGG WLREMVGEAM RPDIGCVGAK LLYGDGTVQH AGVMLQSGPL AMHVCRTDSA
TDTGLDGRLA GTRDYLAVTG ACLAVRRAVF EQVGGFDGEH LPVAYNDIDL CLKVNDAGYR
NICTPFASLL HLESASRGHD HVSEEKQQRA AREQAHASTK WIDRFEHDPY HNPNVQWDWL
TGAHLAPNVG QPWQLAR
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