| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0745 |
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| Symbol | |
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| ID | 7971797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 814901 |
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| End bp | 816151 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791343 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_002942664 |
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| Protein GI | 239813754 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAACA ATCCTGAATC CCACCCCGCC CACCTGAAAG AAGACCCCAT GAACTGGAAA
CTCGCCGCCC GCGCCGCCAA GATGAATCCG TCGGTGCTGC GTGAAATCCT CAAGGTCACC
GAGCGCCCCG GCATCATCAG CCTGGCCGGC GGCCTGCCCT CGCCCAAGAC CTTCCCGATC
CAGGCCTTTG CCGACGCCTG CGCCGAGGTG CTGCACAACG ACGGCCAGGC CGCGCTGCAA
TACGCCGCGA GCGAAGGCTA TGCGCCGCTG CGCCAGGCGG TGGCCGACAT GCTGCCGTGG
AACGTCGATC CCGCGCAGGT GCTCATCACC ACCGGCTCGC AGCAGGGCCT GGACCTGGTG
GCCAAGGTGC TCATCGATCC GGGCAGCAAG GTGCTGGTCG AGACGCCCAC CTACCTGGGC
GCGCTGCAGG CCTTCGGCCC GATGGAGCCG AACCCGGTGA GCGTGGCGAG CGACGATGAA
GGCGTGATCG TCGAAGACCT GGTGGCCAAG GCGAAGGATG GGCGCTTCAT CTACCTGCTG
CCCAACTTCC AGAACCCCAC CGGCCGCACC ATGACCGAGG CGCGCCGCGC CGCCGTGTCG
GCCGCCGCGG CCGCGGCCGG CCTGCCGATC GTCGAGGACA ACCCCTACGG CGAACTGTGG
TTCGACGAAG CCCCGCCGCT GCCGCTCACG GCGCGCAATC CCGAAGGCTG CATCTACCTG
GGCTCGTTCT CGAAGGTGCT CGCACCGGGC CTGCGCCTGG GCTTCCTGGT GGCGCCGAAG
GCGATCTTCC CGAAGCTGCT GCAGGCCAAG CAGGCGGTCG ACCTGCACAC GCCGATCTTC
ACGCAGCGCA TGGTCTCGGC CGTGATGAAG GACAACTTCC TCGAGCGCCA CGTGCCCACC
ATCCGCGCGC TCTACAAGCG CCAGCGCGAC GCGATGATGG CCGCGCTCAC GCGCGAGATG
GCCGGGCTGG ACGTGAAGTT CAACGCGCCC AAGGGCGGCA TGTTCCTGTG GGCCCGCCTG
CCCGAGGGCA TCGACACCGT CGCGCTCCTG CCCAAGGCGG TGGAGCGCAA CGTGGCCTTC
GTGCCGGGCG CGCCCTTCTA TGCGGACCAG GGCGATCCGC GCACGCTGCG CCTGTCCTTC
GTGACGGCCA GCGTCGAGGA GATCGACACC GCGATCGCCG CGCTGGCCCT CGCGCTGCGC
GAAGAGCTGG CGCTGCTGGG CGAACGCAGG CTCGCGCCCG AACCCGTCTG A
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| Protein sequence | MPNNPESHPA HLKEDPMNWK LAARAAKMNP SVLREILKVT ERPGIISLAG GLPSPKTFPI
QAFADACAEV LHNDGQAALQ YAASEGYAPL RQAVADMLPW NVDPAQVLIT TGSQQGLDLV
AKVLIDPGSK VLVETPTYLG ALQAFGPMEP NPVSVASDDE GVIVEDLVAK AKDGRFIYLL
PNFQNPTGRT MTEARRAAVS AAAAAAGLPI VEDNPYGELW FDEAPPLPLT ARNPEGCIYL
GSFSKVLAPG LRLGFLVAPK AIFPKLLQAK QAVDLHTPIF TQRMVSAVMK DNFLERHVPT
IRALYKRQRD AMMAALTREM AGLDVKFNAP KGGMFLWARL PEGIDTVALL PKAVERNVAF
VPGAPFYADQ GDPRTLRLSF VTASVEEIDT AIAALALALR EELALLGERR LAPEPV
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