| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0735 |
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| Symbol | |
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| ID | 7971787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 806728 |
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| End bp | 807633 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791333 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942654 |
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| Protein GI | 239813744 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.645433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG AAAATCTCTC GGACCTGCAG GTTCTGGTGC AGACCGCCCG CGGCGGCACG
CTCACGGCCG CGGCCCATGC GCTCGGCATG ACGCCGGCGG CGGCCAGCGC CACGCTCAAG
CGGCTGGAAA CGCAGCTCGG CGCCCGGCTG TTCGAGCGCT CGACCCGCGC CATGCGCCTG
ACTTCGCAGG GCCAGACGCT GCTCGACTAC GCGGTGCGCG CCTTCGAGCT GCTGGACGAA
GGCGAGTCGC TGGTCACGGC CGAGCGCGGC GAGCTGGTCG GCACCTTGCG CGTGGCTGCC
CCATCGGACC TCACGCGCAG CACGCTGCTG CCCTGGTTCG ACGAATTCCT GGCGCTGCAC
CCGGGCGTGC AGCTGTCGCT GTCGGTCGGC GACCGGCTGC TCGACGTGAC GCGCGACGAG
GTCGACGTGG CGCTGCGCTA CGGCGCGCTG GCCGATTCAC GGCTGGTGGC ACGGCCGTTC
GCGCTGACCA ATCCGCTGCT CACCGCATCG CCCGCCTACC TGCGCCGCCA CTCCGCGCCG
AAGACGCCGC AAGACCTGGT GCACCACAAC TGCCTCACCT TCGACCGCGG CGGGCGCCGC
CACCGCACCT GGCGCTTCGC GCAGAACGGC CAGTGGACCG AAGTGCGCGT GAAGGGCGAC
CGCAGCGTCG ACGACGCCTC GCTCGCGCGC GAGTGGGCCG TGGCGGGCTT GGGCATCGTG
CTGAAGTCGG CGCTCGACGT GCGCGAAGAC CTTCGCAAGG GCGCGCTGGT GCGGCTGCTG
CCCGAATGGG ACACCGAGCC CTATCCGCTG CACGCCCTCT TGCCGAGCGG ACGCTTCGTG
CCCGCGCGCG TAAGGGCATT GGTCAATTTC CTGGCGCTGA AGTTCGAGGC GCTGACGGCT
GCTTAG
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| Protein sequence | MKIENLSDLQ VLVQTARGGT LTAAAHALGM TPAAASATLK RLETQLGARL FERSTRAMRL
TSQGQTLLDY AVRAFELLDE GESLVTAERG ELVGTLRVAA PSDLTRSTLL PWFDEFLALH
PGVQLSLSVG DRLLDVTRDE VDVALRYGAL ADSRLVARPF ALTNPLLTAS PAYLRRHSAP
KTPQDLVHHN CLTFDRGGRR HRTWRFAQNG QWTEVRVKGD RSVDDASLAR EWAVAGLGIV
LKSALDVRED LRKGALVRLL PEWDTEPYPL HALLPSGRFV PARVRALVNF LALKFEALTA
A
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