| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0713 |
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| Symbol | |
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| ID | 7974676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 776522 |
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| End bp | 777430 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791312 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942633 |
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| Protein GI | 239813723 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCGC CCGAGCTTTC CAGCCGCCAA CTGCGCGCGT TCACGGCCTT GGCCGAGCAG
CGCAACTTCA CGCGCGCCGC GCAGACCTGC CACTTGTCGC AGCCCGCGTT CAGTGCACTG
ATCCGTACGC TCGAGGAAAC GCTGGGCGCG CGGCTGTTCG ACCGCGACAC GCGCAGCGTG
CAGCTCACGC CCGAGGGCCG GCTGTTCGAA CCCTCGGCGC GGCGGCTGCT GGACGACATG
CAGGGCGCCA TCGGCGACCT GGCCGACCAT GCCCAGCGGC GCAAGGGCCG CGTCAGCGTG
GCGGCCCTGC CCTCCCTGGC GGCGGGCCGG CTGCCGGCCA TATTGGCGGA GTTCATGCAG
GCATGGCCCG GCATCACGGT CGAGCTGCAC GATGCGCTGT CGGACGCCTG CATTGCCCAG
CTGCGCAGCC ACCAGGCGGA TTTCGCGCTG GCGGCAACGG GTGCCGGCGC GGCCGCGGCC
AGCGACCTGC GCGGACGCAA GCTCTGCGGC GACCGCTTCC ACCTGGTCTG CCGCAAGGAC
CATCCGCTCG CCGGCGCCGC CAGGCTCACG GCACGGCAAC TCGCGCCATG GCCCTTCATC
CAGATGGCGC GCAACAGCAG CGTGCGCCAG TCGCTCGACG CCGCGCTGCA TCCGCTGCGG
CTCAATGCGG TGTTCGAGGT CGAGCACCTG GCCACGGTGA TGGGGCTGGT CGAGGCCGGC
ATCGGCATCA GCGTGGTGCC GGAACTCACG CTCTTCCACT TCCGGCGCGA GACGCTGGTG
ACGCGGCCGC TGCCGCTGCC CGGCCTCACG CGCACCATCT ACCTGGTGCA GCGCCGGGAG
GGCAGCCTCT CGGTGGCGGC GCAGACGCTG CACGACCTGG TCCTCGAACG GCTGGGCACG
CCGGCATGA
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| Protein sequence | MPAPELSSRQ LRAFTALAEQ RNFTRAAQTC HLSQPAFSAL IRTLEETLGA RLFDRDTRSV
QLTPEGRLFE PSARRLLDDM QGAIGDLADH AQRRKGRVSV AALPSLAAGR LPAILAEFMQ
AWPGITVELH DALSDACIAQ LRSHQADFAL AATGAGAAAA SDLRGRKLCG DRFHLVCRKD
HPLAGAARLT ARQLAPWPFI QMARNSSVRQ SLDAALHPLR LNAVFEVEHL ATVMGLVEAG
IGISVVPELT LFHFRRETLV TRPLPLPGLT RTIYLVQRRE GSLSVAAQTL HDLVLERLGT
PA
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