Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0581 |
Symbol | |
ID | 7973564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 635768 |
End bp | 636961 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644791187 |
Product | elongation factor Tu |
Protein accession | YP_002942510 |
Protein GI | 239813600 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG GTAAATTCAC CCGCACCAAG CCGCACGTGA ACGTGGGCAC GATCGGTCAC GTTGACCACG GCAAGACCAC GCTGACGGCG GCCATCGCCA CGGTGCTGTC GGCCAAGTTC GGCGGCGAAG CCAAGGCCTA CGACCAGATC GACGCGGCGC CCGAAGAAAA GGCCCGCGGC ATCACCATCA ACACCGCCCA CGTCGAGTAC GAGACGGCCA ACCGCCACTA CGCGCACGTC GACTGCCCCG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGCGCGGC CCAGATGGAC GGCGCCATCC TCGTGTGCTC GGCCGCCGAC GGCCCCATGC CCCAGACCCG CGAGCACATC CTGCTGGCGC GCCAGGTGGG TGTGGGCTAC ATCATCGTGT TCCTGAACAA GTGCGACATG GTGGACGACG CCGAACTGCT CGAGCTCGTC GAAATGGAAG TGCGCGAACT GCTCGACAAG TACGAGTTCC CGGGCGACGA CACCCCCATC ATCCACGGCT CGGCCAAGCT CGCCCTGGAA GGCGACAAGG GCAAGCTCGG TGAAGAAGCC ATCATGAAGC TGGCCGAAGC CCTCGACACC TACATCCCGA CGCCCGAGCG CGCCGTGGAC GGCACCTTCC TGATGCCCGT GGAAGACGTG TTCTCGATCT CCGGCCGCGG CACCGTCGTG ACCGGCGCCG TCGAGCGCGG TGTCATCAAG GTCGGCGAGG AAATCGAGAT CGTCGGCATC CGCCCGACCG TCAAGACCAC CTGCACCGGC GTGGAAATGT TCCGCAAGCT GCTGGACCAA GGCCAGGCGG GCGACAACGT CGGCGTGCTG CTGCGCGGCA CCAAGCGCGA AGAAGTCGAG CGCGGCCAGG TGCTGTGCAA GCCCGGCTCG ATCAAGCCGC ACACGCACTT CACCGCCGAG GTGTACGTGC TGTCCAAGGA CGAAGGTGGC CGTCACACGC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ACTTCCGCAC GACGGACGTG ACCGGCGCGA TCGAGCTGCC CAAGGACAAG GAAATGGTCA TGCCTGGCGA CAACGTCAGC ATCACCGTGA AGCTGATCAA CCCGATCGCG ATGGAAGAAG GCCTGCGCTT CGCCATCCGC GAAGGCGGCC GCACCGTGGG TTCGGGCGTC GTGGCAAAGA TCCTCGACAT CTAA
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Protein sequence | MAKGKFTRTK PHVNVGTIGH VDHGKTTLTA AIATVLSAKF GGEAKAYDQI DAAPEEKARG ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLARQVGVGY IIVFLNKCDM VDDAELLELV EMEVRELLDK YEFPGDDTPI IHGSAKLALE GDKGKLGEEA IMKLAEALDT YIPTPERAVD GTFLMPVEDV FSISGRGTVV TGAVERGVIK VGEEIEIVGI RPTVKTTCTG VEMFRKLLDQ GQAGDNVGVL LRGTKREEVE RGQVLCKPGS IKPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGAIELPKDK EMVMPGDNVS ITVKLINPIA MEEGLRFAIR EGGRTVGSGV VAKILDI
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