| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0560 |
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| Symbol | |
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| ID | 7972970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 619011 |
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| End bp | 620093 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791163 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002942489 |
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| Protein GI | 239813579 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2516] Biotin synthase-related enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC TCCAGTCCTT CGGGTTGCGG CTGGTTGATC CTTCGGCCGG CGTGGCAAGC
CGCCGCGGCG GCGCGGGCCC GTCAGACCAC AAGGCCGTGA CGGTGGACGG CCACACGATC
ATGGTGCCGG TCCACACTTC GAGCGCCTGG CATTCGCCGT TCACGGCCGA GGCGCCCGAT
GCGCGGGGCG TGAGCCGCGT GATGCGCGGC AGCATTCCCA TTGCGAGCAT CAGCTTTCCG
AAGCAGCCGC GCTTCTATGC GATGCAGACC TTCGACGGCG TGCCCTATTC GCACATTGCC
ACGCTGCACG GCAGCGACGT GCTCGCCACC ACGGTGCTGC AGAGCTGCAT CCGCTACGAG
AGCCGCAAAA AGAGCTGCAA GTTCTGCGCG ATCGGCCAGT CGCTCGCGGC CGGCCGCACC
ATCGCGCGCA AGACGCCCGA GCAGCTGGCC GAAGTGGCGC GCGCGGCCGT GCTGCTCGAC
GGCGTGAAGC ACATGGTGAT GACCACCGGC ACGCCCAACG CCACCGACCG CGGCGCGGCC
ATCCTCTGCG AGAGCGCCTT CGCGATCAAG GCCGCGGTCG ACCTCCCGAT CCAGGGCCAG
TGCGAGCCGC CCGACGACGA CCAGTGGTTC CACCGCATGA AGGCCGCGGG CATCGACACG
CTGGGCATGC ACCTGGAGGT GGTCACGCCC GAGGTGCGCG AACGCATCAT GCCGGGCAAG
GCCAGCGTGC CGGTCTCGCG CTACATGAGC GCCTTCGAGG CGGCCGTGCG CGTGTTCGGG
CGCGGCCAGG TCAGCACCTA CATCCTGGCC GGGCTGGGCG ACACGCGCGA GGCCATCCTG
GACACCTGCG ACCAGCTGCT CGCACGCGGC GTGTACCCCT TCGTCGTGCC CTTCGTGCCG
ATCAGCGGCA CGCCGCTCGA GGACCATCCG GCACCGTCTC CGGAATTCAT GAAGTCGCTG
CTGGCCCCGC TGGGCGAGCG CGTGGTGGCC GCGGGCCTGC GCTCGGCCGA CATCAAGGCG
GGCTGCGGCA AGTGCGGCGC CTGCTCCTCG CTCTCGATCT ACGAAAAAGA AAGCGAAAGC
TGA
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| Protein sequence | MTELQSFGLR LVDPSAGVAS RRGGAGPSDH KAVTVDGHTI MVPVHTSSAW HSPFTAEAPD
ARGVSRVMRG SIPIASISFP KQPRFYAMQT FDGVPYSHIA TLHGSDVLAT TVLQSCIRYE
SRKKSCKFCA IGQSLAAGRT IARKTPEQLA EVARAAVLLD GVKHMVMTTG TPNATDRGAA
ILCESAFAIK AAVDLPIQGQ CEPPDDDQWF HRMKAAGIDT LGMHLEVVTP EVRERIMPGK
ASVPVSRYMS AFEAAVRVFG RGQVSTYILA GLGDTREAIL DTCDQLLARG VYPFVVPFVP
ISGTPLEDHP APSPEFMKSL LAPLGERVVA AGLRSADIKA GCGKCGACSS LSIYEKESES
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