| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0473 |
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| Symbol | |
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| ID | 7970214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 516023 |
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| End bp | 517264 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791076 |
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| Product | putative RNA methylase |
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| Protein accession | YP_002942402 |
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| Protein GI | 239813492 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGATC TCTCTCTCTT TTTGCCTTGC GCCGCCGGCG TCGAGGAATT CCTCGCGCAG
GAAGTCCATG CGCTCACCGG CCGCGTCGGC CAGGACCTGC TCACGCTGCG CGGCGGCGTG
CGGGTGCGCG CCGAATGGCG CGACGCGCTC AAGCTCAACC TGCACAGCCG GCTCGCCCAG
CGCGTGCTGG TCGAACTGGC CCACGCGCCC TACCGCAGCG AGAACGACCT CTACGCCATC
GCGAGCGGCG TGGCCTGGGA GATCTGGTTC ACGCCCAAGC AGACCTTCAA GATCGAGACC
ACGGCGCAGC ACAGCCCGCT GCAGAGCCTG AACTTCGCCA CCCTGCGCAT CAAGGACGCC
ATTGCCGACC GCTTCCGCGC CAAGGCGGGC GGCGTGCGCC CGAGCATCGA GACCCAGTGG
CCCGACTGCC GCGTGTTCGC CCACCTGACC ACCGAGCACT GCACGCTCTA CATCGACACC
TCCGGCGAGC CGCTCTTCAA GCGCGGCTGG CGCCAGGACA AGGGCGATGC GCCGCTGAAG
GAAACGCTGG CCGCCGCCAT GCTGGCCGCC AGCGGCTGGT GGAACCCCGA AACCGGCGCC
GTGGCCGCCG AGCCGCTGTA CGACCCCTGC TGCGGCAGCG GCACCATCGC CATCGAGGCG
GCGCAGATCG CGCGCGGCAT TGCGGCCGGG TCGCTCAGGC GCTTCGGCTT CGAGAAGCTG
CTGCCGTTCC AGGCGCACGT CTGGGACGCC ATCAGGAAAG AGGCCCAGTC GTCGGCGGTG
CCGCGCGATG TCGCCATCTT CGGCTCCGAC GTCTCGCACC GCATGGTCGA CTTTGCCGAG
CGCAACGCGG AGCGCGCCGG CGTTGCCGAT GCCATCGAGT TCCGCGGCGG CGACGCGCTG
CAGCGCATGC CGCCGGCCGA GGGCGGGGTG ATCATGCTCA ACCCGCCGTA CGGCGAGCGC
ATCGAGGTCG GCGGCGTGGC GCGCTTCGGC GCCCGCGAGG CCGCGCAGAC CCCGGGCGAG
GGCGGCGGTG AAGGCAGCGA CGGCGGCGGC GATTTCTTTC CGCAGCTCGC CACCCATTGG
AAGAAGAACT ACGCCGGCTG GACCGCCTGG GTGCTCACGC CCGACCTGAA GCTGCCCAGG
CAGATGCGGC TGAAGGAATC GCGCCGCGTG CCGATGTGGA ACGGGCCCAT CGAGTGCCGG
CTGTTCCGTT TCGACATGGT TGCGGGTTCG GCCAGGAAGT AG
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| Protein sequence | MNDLSLFLPC AAGVEEFLAQ EVHALTGRVG QDLLTLRGGV RVRAEWRDAL KLNLHSRLAQ
RVLVELAHAP YRSENDLYAI ASGVAWEIWF TPKQTFKIET TAQHSPLQSL NFATLRIKDA
IADRFRAKAG GVRPSIETQW PDCRVFAHLT TEHCTLYIDT SGEPLFKRGW RQDKGDAPLK
ETLAAAMLAA SGWWNPETGA VAAEPLYDPC CGSGTIAIEA AQIARGIAAG SLRRFGFEKL
LPFQAHVWDA IRKEAQSSAV PRDVAIFGSD VSHRMVDFAE RNAERAGVAD AIEFRGGDAL
QRMPPAEGGV IMLNPPYGER IEVGGVARFG AREAAQTPGE GGGEGSDGGG DFFPQLATHW
KKNYAGWTAW VLTPDLKLPR QMRLKESRRV PMWNGPIECR LFRFDMVAGS ARK
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