| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0426 |
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| Symbol | |
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| ID | 7970167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 464836 |
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| End bp | 466146 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791029 |
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| Product | glutamate/cysteine ligase |
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| Protein accession | YP_002942355 |
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| Protein GI | 239813445 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02049] glutamate--cysteine ligase, T. ferrooxidans family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.553194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCCGC ATCTCGTCAC CGCCCTGACC GGCCCGATCA ACGAACTGGA ACAGCGCGTC
CTCGACTCCA CGCCCGCCAT CGAGCGCTGG TTCCGGCTCG AATGGATGGA GCACACGCCA
CCGTTCTACA GCGCGGTCGA CATCCGCAAC GCGGGCTTCA AGCTGGCGCC GGTCGACACC
AACCTCTTCC CCGGCGGCTG GAACAATCTC ACCAAGGAGA TGCTGCCGCT GGCGGTGCAG
GCCGCGCAGG CCGCCATCGA GAAGATCTGT CCGGAAGCGC GCAACCTGCT GGTCATTCCC
GAGAACCACT CGAAGAACAC CTTCTATCTC GCCAACGTCG CCCAACTGGT GCGGATCTTC
CACATGGCGG GACTGAACGT GCGCGTGGGC TCGATCGATC CGGCCATCAA GTCGCCCAAG
AAGATCGAGC TGCCCAACGG CGAGACCGTG TGCCTGGAGC CCGTGGTGCG CAGCAAGCGC
CGCCTCGGGC TCAAGAACTT CGATCCCTGC ACCATCCTGC TCAACAACGA GCTGACGGCC
GGCACGCCGG GCATCCTGGA AGACCTGCAC GAGCAGTACC TGTTGCCGCC GCTGCACGCG
GGCTGGTCGG TGCGGCGCAA GAGCAACCAC CTGCACAGCT ACGAGGAGCT GTCCAAGCGC
TTCGGCAAGC TGCTGGGCAT CGACCCCTGG CTGATCAATC CGATCTATGC GCGCGCCGAC
GGCGTCGATT TTTCCGAAGG CCGCGGCATC GACGTGCTGA CCAGCCACGT GGACGCGGTG
CTGACCAAGG TGCGCCGCAA GTACAAGGAA TACGGCATCA ACGAGAAGCC CTTCGTGGTC
GTCAAGGGCC ATGTCGGCGG CGACGGCCCG GGCGTGGTCA CCGTGCGCGA CGCGAAGGAA
GTCGAGGGCC TGGTCGGCAA GCCGCGCAGC GCTCCGGCAG GCAAGGCGGG CGCGGCCGCC
AGGGAGCTGC GCGAGCCCGG CGAGGTGATC GTGCAGGAAG GCGTGCTGAC CAACGAGCGC
GTGCACAACG GCGTGGCCGA GCCGGTGGTC TACATGATGG ACCGCTACGT GGTGGGCGGC
TTCTACCGCG TGCATGCCGA GCGTGCGCCC GACGAGAACC TCAAGCTCCC GGGCGCGAGC
TTCGTGCCGC TGGCGTTCTC CGAAAGCGCG CACCTGCCGC AGCCCGGCGC CAAGCCCGGC
GCGAGCGCCC CGAACCGCTT CTACATGTAT GGCGTGGTGG GCCGCCTGGC CATGGTGGCC
GCGAGCTACG AGATGGAAGC CACCGATCCG GACGCCGAAA TCTACGAATG A
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| Protein sequence | MVPHLVTALT GPINELEQRV LDSTPAIERW FRLEWMEHTP PFYSAVDIRN AGFKLAPVDT
NLFPGGWNNL TKEMLPLAVQ AAQAAIEKIC PEARNLLVIP ENHSKNTFYL ANVAQLVRIF
HMAGLNVRVG SIDPAIKSPK KIELPNGETV CLEPVVRSKR RLGLKNFDPC TILLNNELTA
GTPGILEDLH EQYLLPPLHA GWSVRRKSNH LHSYEELSKR FGKLLGIDPW LINPIYARAD
GVDFSEGRGI DVLTSHVDAV LTKVRRKYKE YGINEKPFVV VKGHVGGDGP GVVTVRDAKE
VEGLVGKPRS APAGKAGAAA RELREPGEVI VQEGVLTNER VHNGVAEPVV YMMDRYVVGG
FYRVHAERAP DENLKLPGAS FVPLAFSESA HLPQPGAKPG ASAPNRFYMY GVVGRLAMVA
ASYEMEATDP DAEIYE
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