Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0382 |
Symbol | |
ID | 7973526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 415546 |
End bp | 416259 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644790985 |
Product | hypothetical protein |
Protein accession | YP_002942311 |
Protein GI | 239813401 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.681475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCAC AGTGGAAAGC AAAGCACAAG GACCTGGCGG CCAATGCCAA GGGCCGCCTG TTCGGAAAAC TGGCCAAGGA AATCATGGTG GCCGCGCGCA GCGGCGCCGA TCCGGCCTCC AATGCGCGCC TGCGGCTGGT GGTGGAGCAG GCCCGCAAGG TCTCGATGCC CAAGGACACG CTGGACCGCG CCATCAAGAA GGGCGCGGGG CTCAGCGGCG AGGCGGTGCA CTTCGAGCAT GTGATCTACG AAGGCTTTGC GCCGCACCAG GTGCCCGTGA TGGTCGAGTG CCTGACCGAC AACGTGAACC GCACCGCGCC TGAAATGCGC GTGCTGTTCC GCAAGGGCCA GCTCGGCACC TCGGGCTCGG TGTCGTGGGA CTTCGACCAC GTGGGCATGA TCGAGGCCGA GCCTTCGCGT GCCGATGCCG ATGCCGAAGT CGCCGCCATC GAAGCGGGCG CGCAGGACTT CGAGGCGGCC GGCGAAGGCG GCGCCACGGT GTTCCTGACC GACCCGACCG ACCTCGACCT GGTGAGCCGC GCGCTGCCGG CCCAGGGCTT CACCGTGCTG TCGGCCAAGC TGGGCTACAA GCCAAAGAAC CCGGTCGATC CGGCCAGCCT CAGCGCGGAG CACCTCGAGG AGGTCGAAGT GTTCCTGGCC GCCATCGATG CCAACGACGA CGTGCAGAAC GTGTTCGTGG GCCTGGCGGG CTGA
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Protein sequence | MGAQWKAKHK DLAANAKGRL FGKLAKEIMV AARSGADPAS NARLRLVVEQ ARKVSMPKDT LDRAIKKGAG LSGEAVHFEH VIYEGFAPHQ VPVMVECLTD NVNRTAPEMR VLFRKGQLGT SGSVSWDFDH VGMIEAEPSR ADADAEVAAI EAGAQDFEAA GEGGATVFLT DPTDLDLVSR ALPAQGFTVL SAKLGYKPKN PVDPASLSAE HLEEVEVFLA AIDANDDVQN VFVGLAG
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