| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0354 |
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| Symbol | |
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| ID | 7973498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 380248 |
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| End bp | 380952 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790957 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_002942283 |
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| Protein GI | 239813373 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTCG TCTTCACGCC TCCTTCCATC GTCGGCCTGC CCATCGTGGG TTCGAGCGAG
CTGTTCCCGG TGCGCCGGGT CTACTGCGTG GGCCGCAATT ACGCGGCGCA TGCGCGCGAG
ATGGGCTTCG ACCCCGACCG CGAACCGCCG TTCTTCTTCT GCAAGCCGAA CGACGACGCC
TCGGTGGTGC CGGTGGCCGA AGGCGAGACC GGCGCCATTC CGTATCCGCC GCTCACGAGC
AACTACCACT ACGAAGCCGA GCTGGTCGTG GCCATCGGCA AGGGCGGCAA GGACATCGCG
GTGGAGCAGG CGGCCAGCCA CATCCACAGC TACGCCGTGG GCCTGGACAT GACGCGGCGC
GACCTGCAGA TGAAGATGCG CGAAGCCGGC CGGCCATGGG AAATCGGCAA GGCCTTCGAT
TTCTCGGCGC CCATGGCGCC GCTGCGCACG CTGGCCGACG TGGGCGAGAT CAATGCCGGC
GCCATCCGGC TCGAAGTGGA TGGCCAGGTG CGCCAGAACA GCGACATCAC GCACCTGATC
TGGTCGGTCA ACGAGGTGAT CGCCAATCTC TCGACGCTCT TCACGCTGCA GCCCGGCGAC
CTGATCTTCA CGGGCACGCC CGAAGGCGTG GGCGCGGTGA AGCCTGGCCA GACCCTCAAG
GTGAGCATCG ACAAGCTGCC TTCGCTCACT GTCCGCATCG ACTGA
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| Protein sequence | MSFVFTPPSI VGLPIVGSSE LFPVRRVYCV GRNYAAHARE MGFDPDREPP FFFCKPNDDA
SVVPVAEGET GAIPYPPLTS NYHYEAELVV AIGKGGKDIA VEQAASHIHS YAVGLDMTRR
DLQMKMREAG RPWEIGKAFD FSAPMAPLRT LADVGEINAG AIRLEVDGQV RQNSDITHLI
WSVNEVIANL STLFTLQPGD LIFTGTPEGV GAVKPGQTLK VSIDKLPSLT VRID
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