| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0353 |
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| Symbol | |
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| ID | 7973497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 379084 |
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| End bp | 380172 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790956 |
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| Product | gentisate 1,2-dioxygenase |
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| Protein accession | YP_002942282 |
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| Protein GI | 239813372 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCCA CCGCCCAGAA ATCCGCCGCC CCGGCGCCCG CCAATGCCGC GGAGCGCCGC
AACTACTACG AGCGCATCCG CCCGCTGCAC CTCACGCCGC TGTGGGAGTC GCTGCATGCG
CTGGTGCCGC GCGAGCCCGC CACGCCCTGC GTGCCGGCGC TCTGGCGCTA CGACGAGATC
CGCCCGCTGC TGATGGAATC GGCCGCGCTC ATCACCGCCG AGGAAGCGGT GCGCCGCGTG
CTCGTGCTCG AGAACCCGGC GCTGCCCGGC AACTCGTCGA TCACGCAGTC GATCTACGCG
GGCCTGCAGC TCATCATGCC GGGCGAGGTG GCGCCCTCGC ACCGCCACGT GCAGTCGGCG
CTGCGCTTCA TCGTCGACGG CAAGGGCGCC TACACCACGG TGGGCGGCGA GCGCACCACC
ATGTACCCGG GCGACTTCAT CATCACGCCG TCGTGGGCCT GGCACGACCA CGGCAACGAG
GGCATTGGCG GCACCGTGGA GCCGGTGGTC TGGCTCGACG GGCTCGACAT TCCGATGCTG
CGCTTCTTCG ACGCCGGCTT TGCCGAGAAC GACGACGCCA AGGTGCAGCA CGTGGCGCGC
CCCGAGGGCA ACAGCCTCGC GCGCTTCGGC CACAACATGG TGCCGGTGCG CCACGACCAC
GCATCGCCCA CCTCGCCGAT CTTCAACTAC CCCTATGCGC GCAGCCGCGA GGCGCTGGCC
CTGCTGCAGA AGCAGGAAGC GCCCGATGCC TGGCTGGGCC ACAAGCTGCG CTACATCAAC
CCGCTGACGG GCGGCGCGCC GATGCCCACC ATCGGCACCC AGCTGCAGCT GCTGCCCCGG
GGCTTCGCGG GCAAGGCGCA CCGCGCCACC GACGGCACCG TCTACAGCGT GGTCGAAGGC
CGCGGCATCG CGGAGATCGC GGGCCGGCGC TTCGAGTTCG GCCCGCGTGA CACCTTCGTG
GTGCCTTCGT GGGCGCCGCT GCGCCTTTCG GCGCCCGGCG AGGACGTGGT GCTCTTCAGC
TTTTCGGACC GTCCCGTGCA GCAGGCCATG GGCATCCTGC GCGAAGCCTT TCTCGACGAA
GACGCCTGA
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| Protein sequence | MNPTAQKSAA PAPANAAERR NYYERIRPLH LTPLWESLHA LVPREPATPC VPALWRYDEI
RPLLMESAAL ITAEEAVRRV LVLENPALPG NSSITQSIYA GLQLIMPGEV APSHRHVQSA
LRFIVDGKGA YTTVGGERTT MYPGDFIITP SWAWHDHGNE GIGGTVEPVV WLDGLDIPML
RFFDAGFAEN DDAKVQHVAR PEGNSLARFG HNMVPVRHDH ASPTSPIFNY PYARSREALA
LLQKQEAPDA WLGHKLRYIN PLTGGAPMPT IGTQLQLLPR GFAGKAHRAT DGTVYSVVEG
RGIAEIAGRR FEFGPRDTFV VPSWAPLRLS APGEDVVLFS FSDRPVQQAM GILREAFLDE
DA
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