| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0352 |
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| Symbol | |
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| ID | 7973496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 378039 |
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| End bp | 378938 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790955 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942281 |
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| Protein GI | 239813371 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGC TCGATCTCGA ATGGCTGCTG GTGTTCGACG AGGTCTACAA GACGGCCAAC
GTGTCGAGCG CGGCCGAGCG GCTCGGGCTT TCGCAGTCGG CGGCTAGCAC CGCGCTGGCG
CGGCTGCGCA CGCATTTCGG CGACAAGCTG TTCGTGCGCA CCTCGCGCGG CATGGAGCCC
ACGCCCTATG CGCGGCAGAT CCAGCCGCTC GTGCTCGACA TCCTCGACCG GCTGAACCGG
GCCAAGGGCG GACGCGCGAG CTTCGACCCT GCCAGCGCGG CGCGCAGCTT CCGCATCTGC
ATGACCGACA TCAGCGAGGT GGTGCTGCTG CCAAGCTTGC TCGATCACCT GCGGCGCACG
GCGCCCGGTG TGCGCATCGA GACCGAGATC ATCTCCACCG AGAGCGGGCG CCGGCTCGAG
GAGGGCGCGG TGGACCTGGC GGTGGGCTTC ATGCCGCAGC TGGACGCGGG CTTCTACCAG
CAGACGCTGT TCATGCAGAA CTTCGTCTGC CTGGCCGCGC GCAACCATCC GCGCATCGGC
GAGCGGCTCA CGCGCAAGCG CTTCGAGAGC GAGGCGCATG CGGTGGTGGC TTCGTCGGGC
ACCGGCCATG CCATCGTCGA CAAGACCATC GCGCGGCTGG GGCTCCGGCG CAACGTGGTG
GCCAGCCTGT CGAGCTTCCT GAGCGTGGCG CGCATCGTGG CGCACACGGA GCTGATCGTG
ATCGTGCCCA GCATCCTCGG CAAGGTGCTG GCCACGCAGG AGCCGGTGAA GCTGCTGGAA
CCGCCCTTCG AGCTGCCGGC CTATGCCGTC AAGCAGCACT GGCATGAGCG CTTCCATGCG
GACGCAGGCA ATGCCTGGCT GCGGCGCACG CTGGCGGAGC TGTTCGGCGG CGGCGGCTGA
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| Protein sequence | MAQLDLEWLL VFDEVYKTAN VSSAAERLGL SQSAASTALA RLRTHFGDKL FVRTSRGMEP
TPYARQIQPL VLDILDRLNR AKGGRASFDP ASAARSFRIC MTDISEVVLL PSLLDHLRRT
APGVRIETEI ISTESGRRLE EGAVDLAVGF MPQLDAGFYQ QTLFMQNFVC LAARNHPRIG
ERLTRKRFES EAHAVVASSG TGHAIVDKTI ARLGLRRNVV ASLSSFLSVA RIVAHTELIV
IVPSILGKVL ATQEPVKLLE PPFELPAYAV KQHWHERFHA DAGNAWLRRT LAELFGGGG
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