| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0346 |
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| Symbol | |
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| ID | 7973490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 373642 |
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| End bp | 374880 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644790949 |
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| Product | Formyl-CoA transferase |
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| Protein accession | YP_002942275 |
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| Protein GI | 239813365 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACA CCTCTTCTTC TCCCCCGGCC GCGGGCCCGC TGGCCGGCCT CAAGGTCGTC
GAGCTCGGGC AGCTGATCGC CGGGCCTTTC GCGGCGCGCA CGCTGGCCGA CTTCGGCGCC
GAGGTCATCA AGATCGAGCC GCCGGGCGCG GGCGATCCGC TGCGCACCTG GCGGCTCTTG
AAGGACGGCA CCTCGGTGTG GTGGCAGGTG CAGTCGCGCA ACAAGCGTTC GCTCGCGCTC
GACCTGCGCC AGGCCGAGGC GCAGGCCGTG GTGCGCCAGC TGGCCGCCGA GGCCGACGTG
CTGGTCGAGA ACTTCCGCCC CGGCGCGATG GAAGGCTGGG GCCTCGGACC CGGCGAGCTG
CTGGCCGCCA ACCCCGCGCT CGTGATGCTG CGCATCAGCG GCTACGGCCA GACCGGCCCC
TACCGCGACC GGCCGGGCTT CGGCGTGGTG GCCGAGGCCA TGGGCGGGCT GCGCCACCTC
ACGGGCGAGC CCGGCCGCGT GCCGGTGCGC GTGGGCGTTT CGATCGGCGA CACGCTGGCC
TCGCTGCACG GCGTGATCGG CGTGCTGATG GCGATGCAGC ACCGCCATGC CACCGTCAGC
GCCGAGTATC CGAAGGGCCG GGGCCAGGTG GTCGACGTGG CGCTCTACGA GGCGGTCTTC
AACTGCATGG AGAGCTTGCT GCCCGAGTAC AGCGCGTTCG GCGCGGTGCG CGAGGCGGCC
GGCAGCGCGC TGCCCGGCAT CGCGCCGACC AACGCCTACC GCTGCGCCGA CGGCGGCTAC
GCCATCGTCG CGGGCAACGG CGACAGCATC TTCCGCCGGC TGATGGCGTG CATCGGCCGG
CCCGACCTCG CGGCCGATCC GTCATTGGCT GGCAACACGG GCCGGGTGGC GCAGGTGGAA
ATGCTCGACG CCGCCATCGG CGAGTGGACG GCAGCGCGCA CGGTGGACGA GGTGCTGGCC
GCGCTCGATG CGGCGCAGGT GCCGGCCGGC CGCATCTACA CCATTGCCGA CATCGCGGCC
GACTCGCACT ACGCCGCGCG CGGCATGCTG CAGCAGGTGC ACATGCCGGA CGGCAGCACG
CTCGCGGTGC CCGGCTTCGT GCCCAAGCTC TCGCTCACGC CGGCCAGCCA CCGGCGCAGC
GCGCCCGCGC TGGGCGCGGA CACCGATGCG GTCCTGAAGG AGATCGGCCT GAACGCCGAG
CAGATCGCCG CGCTGCATGC GCGCGGGATC GTCGGCTGA
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| Protein sequence | MTNTSSSPPA AGPLAGLKVV ELGQLIAGPF AARTLADFGA EVIKIEPPGA GDPLRTWRLL
KDGTSVWWQV QSRNKRSLAL DLRQAEAQAV VRQLAAEADV LVENFRPGAM EGWGLGPGEL
LAANPALVML RISGYGQTGP YRDRPGFGVV AEAMGGLRHL TGEPGRVPVR VGVSIGDTLA
SLHGVIGVLM AMQHRHATVS AEYPKGRGQV VDVALYEAVF NCMESLLPEY SAFGAVREAA
GSALPGIAPT NAYRCADGGY AIVAGNGDSI FRRLMACIGR PDLAADPSLA GNTGRVAQVE
MLDAAIGEWT AARTVDEVLA ALDAAQVPAG RIYTIADIAA DSHYAARGML QQVHMPDGST
LAVPGFVPKL SLTPASHRRS APALGADTDA VLKEIGLNAE QIAALHARGI VG
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