| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0345 |
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| Symbol | |
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| ID | 7973489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 372472 |
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| End bp | 373362 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790948 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002942274 |
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| Protein GI | 239813364 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCCG ATCTGGAAAT CGTCGAAGTC CGCGGTGACG AATCGTTCAC CGCCTGGGCG
CACGGCTATC CGTATCGCAC GGTGCGCTGG CATTTCCACC CCGAGTACGA GATCCAGCTG
ATCGTCGAGA CCCGGGGCGT GTATTTCGTG GGCGACCACG TCGGCCACTT CGAGCCCGGC
AACCTCGTGC TCATGGGCCC CGACCTGCCG CACAACTGGA TCAGCGACGT GCCCGCGGGC
CAGAGCGTGG AGCGGCGCGG CATCGTGATC CAGTTTCCGG CCGGGCTGGC GAAGAACATG
GCGGCCACCT TTCCCGAGTT CGAGCGCATC GCGCCGCTCC TGGCCGAATC GGGTTCGGGC
CTGCTCTTCC CGGCCGAGAC CGCCGCCGCC GCCAAGCCGC TGATGGAATC GCTGCTGGAG
GCGCGCGGGC TGCGCCGCGT GATCCTGCTG CTCTCGCTGC TCGAGCTGCT GGCGGACAGC
CAGGACCGCC AGCGGCTCGC GAGCCCTGCG TTCAAGCCCG ACCCCAAGGC CTTCATGTCG
CATGCGATCA ACAACGTGCT CGCGCACATC GCGGCCAACC TGGGCGACGA CCTGCGCGAG
CCGATGCTGG CCGAACTGGT GGGCCAGAGC CCGAGCGCGT TCTCGCGCGC CTTCCGCAAG
CACACGGGCC AGTCGTTCGT GCGCTACGTG AACCGGCTGC GCATCAGCCG CGCCTGCGAG
CTGCTCACCA GCAGCGAGAA GCCGGTGCTC GACGTCTGCA TGGACGTGGG CTTCAACAAC
GTGTCGAACT TCAACCGGCA GTTCCTGCTG CACAAGCGCA TGCCGCCGAC CAAGTTCCGC
AACTTCCATC GCATGCAAGC CGCGGCATCG CGCGCCGCCA GTCCGCCTTA G
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| Protein sequence | MQPDLEIVEV RGDESFTAWA HGYPYRTVRW HFHPEYEIQL IVETRGVYFV GDHVGHFEPG
NLVLMGPDLP HNWISDVPAG QSVERRGIVI QFPAGLAKNM AATFPEFERI APLLAESGSG
LLFPAETAAA AKPLMESLLE ARGLRRVILL LSLLELLADS QDRQRLASPA FKPDPKAFMS
HAINNVLAHI AANLGDDLRE PMLAELVGQS PSAFSRAFRK HTGQSFVRYV NRLRISRACE
LLTSSEKPVL DVCMDVGFNN VSNFNRQFLL HKRMPPTKFR NFHRMQAAAS RAASPP
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