Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0319 |
Symbol | |
ID | 7972668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 342070 |
End bp | 342483 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644790922 |
Product | RNP-1 like RNA-binding protein |
Protein accession | YP_002942248 |
Protein GI | 239813338 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCAAGA AACTCTACGT AGGCAACCTC GCCTACTCTG TGCGTGACAA CGACCTGGAA CAGGCTTTCG GCGAGTTCGG CTCGATCGTC AGCGCCAAGG TCATGATGGA ACGCGACACC GGCCGCTCCA AGGGCTTCGG TTTCGTGGAA ATGGGCACCG ACGCTGAAGC GCTGGCTGCC GTCGAAGCCA TGAACGGCCA TTCGCTCCAG GGCCGCGCCC TGACCGTGAA CGAAGCACGT CCGATGGAAG CTCGTCCCCC CCGTACCGGT GGTGGCGGCG GCTACGGCGG CGGCGGCGGT GGTGGTTACG GCGGTGGTGG TGGCGGCGGC GGCTACGGTG GTGGCGGCGG TGGCCGCAGC GGTGGTGGCG GCGGCTACGG CGGCGGCGGC GGCGGTGGTC GCGGCGGCTA CTAA
|
Protein sequence | MGKKLYVGNL AYSVRDNDLE QAFGEFGSIV SAKVMMERDT GRSKGFGFVE MGTDAEALAA VEAMNGHSLQ GRALTVNEAR PMEARPPRTG GGGGYGGGGG GGYGGGGGGG GYGGGGGGRS GGGGGYGGGG GGGRGGY
|
| |