| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0292 |
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| Symbol | |
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| ID | 7972641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 313876 |
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| End bp | 314835 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790895 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002942221 |
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| Protein GI | 239813311 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.540358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAG CCAAGAAGTT CGCCAGCCAG GCCGACATGG AAGAGAAGAA GATCACCTTC
AGCCAGATCT CGGAACACGC CTGGGCCTAC ACGGCCGAGG GCGACCCCAA CACCGGCATC
GTGATCGGCG ACGATTGCGT GCTGGTGGCC GACACCCAGG CCACGCCGGC CATGGCGGCC
GACGTGGTGC GCCGCATCCG CGAAGTGACC GACAAGCCGA TCAAGTACGT GGTGCTCACG
CACTACCACG CGGTGCGCGT GCTGGGCGCG GCCGGCTACG GTGCCGAGCA CATCCTGGCC
AGCCAGGACA CGCGCGACCT GATCGTGGAG CGCGGCGAAG CCGACAAGGC CAGCGAGATC
GGCCGCTTCC CGCGCCTGTT CCAGAACGTC GAGACGGTGC CGCCGGGCCT GACCTGGCCC
ACCATGACCT TCACCGGCAA GATGACGCTG TGGCTCGGCA AGCTCGAGGT GCAGCTGATC
CAGCTGGGCC GCGGCCACAC CAAGGGCGAC ACCGTCGTCT GGCTGCCCGG GGAGCGCACG
CTGCTGTCGG GCGACCTGGT CGAGTTCGGC GCCACGCCGT ATGCGGGCGA CGCCTACTTC
CAGGACTGGC CGCAGACGCT GGACAACATC GCCGCGCTCA AGCCCGCCGC GCTGGTGCCC
GGCCGCGGCG CCGCGCTCAC CACGCCGGCC GAAGTGGCCG AGGGCCTGGC CGGCACGCGC
AACTTCATCT CCGACGTGTA CGCGAGCGTG CAGGAAGGCG TGAAGGCCGG GCGCGACCTG
AACACGGTCT ACAAGGACAC CTACGCCAAG CTCAAGCCCA AGTACAGCCA GTGGGTGATC
TTCGACCACT GCATGCCCTT CGACGTGAGC CGCGCGTACG ACGAGGCCTC GGGCCATGCC
GATCCGCGCG TGTGGACGGC CGAGCGGGAC ATCGAGATGT GGAAGGCACT CGAGGGCTGA
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| Protein sequence | MSQAKKFASQ ADMEEKKITF SQISEHAWAY TAEGDPNTGI VIGDDCVLVA DTQATPAMAA
DVVRRIREVT DKPIKYVVLT HYHAVRVLGA AGYGAEHILA SQDTRDLIVE RGEADKASEI
GRFPRLFQNV ETVPPGLTWP TMTFTGKMTL WLGKLEVQLI QLGRGHTKGD TVVWLPGERT
LLSGDLVEFG ATPYAGDAYF QDWPQTLDNI AALKPAALVP GRGAALTTPA EVAEGLAGTR
NFISDVYASV QEGVKAGRDL NTVYKDTYAK LKPKYSQWVI FDHCMPFDVS RAYDEASGHA
DPRVWTAERD IEMWKALEG
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