| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0286 |
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| Symbol | |
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| ID | 7972635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 306258 |
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| End bp | 308225 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790889 |
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| Product | penicillin-binding protein 2 |
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| Protein accession | YP_002942215 |
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| Protein GI | 239813305 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.54247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAA TCCGCAACGT CGCTGCCGAC CTCGCGCGCT TCAAGCGCCG CGTGGTCGTG
ATCGGCCTGG CGGTGCTGTT TGCCTTCAGC CTGCTGTGCG CGCGGCTGGT GTACCTGCAG
GTGGTGCGCC ACGAAGACCT GGCGGAGCAG GCCGAGAGCA ACCGCACGGC CATCGTGCCC
GTGGTGCCCA ACCGCGGCCT GATCCTCGAC CGCAACGGCA TCGTGCTGGC CTCCAACTAT
TCGGCCTACA CGCTGGAGAT CACGCCTTCG AAGGTGGGCG ACGTCGAGGA GACCATCGAA
AGCCTGACCC AGGTGCTCGA GATCTCGCCG CGCGACCGCC GCCGCTTCAA GCGCCTGCGG
GAAGACTCGC GCAGCTTCGA TTCCATTCCG ATCCGCACCC GCCTGAGCGA CGAGGAGGTC
GCGCGCTTCG CTGCGCAGCG CTACCGCTTC CCGGGCGTGG AGATCAAGGC CCGGCTGTTC
CGCAACTACC CGCACGCCGA GCTGGCCTCG CACGTGCTTG GCTACATCGG CCGCATCAAC
CAGCGCGAGA AGACCGCGAT GGAAGACTGG GACGAGGAAG ACCAGGCCAA CTACAAGGGC
ACCGACTACA TCGGCAAGCT CGGCATCGAG CAGAGCTACG AGAAGACGCT GCACGGCCAG
ACCGGCGTCG AGCAAATGGA AACCTCGGCC GGCGGCCGCG CGGTGCGCCG GCTCGCCAGC
CACCCGGCCA CGCCCGGCAA CACCGTGATG CTGTCGCTCG ACATCAAGCT GCAGAAGCTG
GTGGAAGACA TGTTCGGCGA CCGCCGCGGC GCGCTGGTGG CCATCGACCC CAAGTCCGGC
GAGGTGCTGG CCTTCGTGAG CAAGCCCACC TTCGACCCCA ACCTGTTCGT CGAAGGCATC
GACACCGAGA GCTGGCAGGC GCTGACCGAA TCGCTCGACA AGCCGCTTTT GAACCGCGCG
CTGCGCGGCA CCTACCCGCC CGGCTCCACC TACAAGCCCT TCATGGCGCT TGCGGCGCTG
CAGACCGGCA AGCGCGGCCC CAACGTGGTG GTGAACGATC CTGGCTACTT CAACTTCGGC
GGCCACCGCT TCGGCAGCCC CGAGGGCAAC ATCGGCGGCG TCGACATGCG CCGCTCGATC
CAGCTGTCGA GCAACATCTA CTACTACTCG CTGGCCAATG AAATGGGCGT GGACCTGATC
CACGACTTCA TGAAGCCGCT GGGCTTCGGC CAGATCACCG GCATCGACCT GGGCGGCGAG
GTGCGCGGCG TGCTGCCGAG CACCGAGTGG AAGCGCAACG CCTACAAGCG GCCCGAGCAG
AAGAAGTGGT ATGCGGGCGA GACCATCTCG CTGGGCATCG GGCAGGGCTA CAACGCCTTC
ACGATGCTGC AGCTCGCGCA GGCCACCTCC ATCGTGGCCG ACGGTGGCCG CAAGCACAAG
CCGCACCTCG TGCTGGCCAC GCGCAACACC GTGAGCGGGC AGGTGGTGCC GCTGCCCCAG
CCGCCGGCCG AGAACCTGGG CTATTCCGCG GCCAACGTCG CGGTGGTCCG CGAGGGCCTG
ACCAGCGTGG TCACCAGCGG CACTGCGCGC GGCGTGTTCG CCGGCGCGGG CTACCAAGCG
GCCGGCAAGA CCGGCACCGC GCAGGCCGTG ACGCAGGCGC AGAACACCAA GTACAACGCG
CGCGCGCTCG AGGAGCACCA GCGCGACCAC GCGCTGTTCA TGGCCTTTGC GCCGGTCAAC
GATCCGAAGA TCGCGCTCGC GGTGATCGTC GAGAACGCCG GCTGGGGCGC AGGCGCGGCG
GCGCCCATTG CGCGCCGCGT GTTCGACTAC TGGCTGATGG ACCAGTATCC GAGCGAGGCC
GACATGGCCG CCATCAAGGT CGGCAAGGCC ACCGCCCCGA TCGGCAAGCC GCGCGTGGCC
AGCGAAGTGG CTTGGCCGGC AGCGTCGGCC GCCGCAACCG CACCCTGA
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| Protein sequence | MTEIRNVAAD LARFKRRVVV IGLAVLFAFS LLCARLVYLQ VVRHEDLAEQ AESNRTAIVP
VVPNRGLILD RNGIVLASNY SAYTLEITPS KVGDVEETIE SLTQVLEISP RDRRRFKRLR
EDSRSFDSIP IRTRLSDEEV ARFAAQRYRF PGVEIKARLF RNYPHAELAS HVLGYIGRIN
QREKTAMEDW DEEDQANYKG TDYIGKLGIE QSYEKTLHGQ TGVEQMETSA GGRAVRRLAS
HPATPGNTVM LSLDIKLQKL VEDMFGDRRG ALVAIDPKSG EVLAFVSKPT FDPNLFVEGI
DTESWQALTE SLDKPLLNRA LRGTYPPGST YKPFMALAAL QTGKRGPNVV VNDPGYFNFG
GHRFGSPEGN IGGVDMRRSI QLSSNIYYYS LANEMGVDLI HDFMKPLGFG QITGIDLGGE
VRGVLPSTEW KRNAYKRPEQ KKWYAGETIS LGIGQGYNAF TMLQLAQATS IVADGGRKHK
PHLVLATRNT VSGQVVPLPQ PPAENLGYSA ANVAVVREGL TSVVTSGTAR GVFAGAGYQA
AGKTGTAQAV TQAQNTKYNA RALEEHQRDH ALFMAFAPVN DPKIALAVIV ENAGWGAGAA
APIARRVFDY WLMDQYPSEA DMAAIKVGKA TAPIGKPRVA SEVAWPAASA AATAP
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