| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0285 |
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| Symbol | |
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| ID | 7972634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 305680 |
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| End bp | 306201 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790888 |
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| Product | rod shape-determining protein MreD |
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| Protein accession | YP_002942214 |
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| Protein GI | 239813304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2891] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.290835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGC GTCCCGGACA ACAGCAGCTC CTGCTGCCCG TGAGCCCGCT GTTCATGTGG
GCCAGCCTGG TGGTGGCGCT GCTCATCAAC ATGATCCCGA TCGGCCGCGC CGCATGGATG
CCCGACCTGC TCGCGCTGGC CATCGTGTTC TGGGGCGTGC ACCAGCCGAT GCGCGTGGGC
ATCGGCGCGG CCTTCGTCTT CGGGCTGTGC ATGGACGTGC ACCAGTCGTC CATGCTGGGC
CAGCATGCGC TGTCCTACAC CACGCTGGGC TTCTTCGCGA TCACCATCCA CCGGCGCCTG
CTGTGGTACC CGGTGGCCTC GCAGGCGCTG CAGGTGCTGC CGCTCTTTGC GCTGTCGCAG
CTCATCGAGG TGATCACGCG GCTGGTCGGC GGCGGCGTGT TCCCGGGCTG GAGCGTGCTG
GTCTCGCCCG CCATCGAGGC CGCGCTGTGG CCGCTGGCCA CCGCCTTGCT GCTCGCACCG
CAGCTTCGCA CGCCCGACCC CGACGAGAAC CGGCCGCTGT GA
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| Protein sequence | MIKRPGQQQL LLPVSPLFMW ASLVVALLIN MIPIGRAAWM PDLLALAIVF WGVHQPMRVG
IGAAFVFGLC MDVHQSSMLG QHALSYTTLG FFAITIHRRL LWYPVASQAL QVLPLFALSQ
LIEVITRLVG GGVFPGWSVL VSPAIEAALW PLATALLLAP QLRTPDPDEN RPL
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