Gene Vapar_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0282 
Symbol 
ID7972631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp303059 
End bp303358 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content64% 
IMG OID644790885 
Productglutamyl-tRNA(Gln) amidotransferase, C subunit 
Protein accessionYP_002942211 
Protein GI239813301 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0540357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTTT CCGCCTCAGA TATTGCACGC ATCGCCTCCC TGGCGCGGCT GCAGCTTGCT 
TCCGACGAAA GCGAGCGCAT GCTCAGCCAG ATCAACGGCT TCTTTGACCT GGTCGAACGC
ATGCGTTCGG TCGATACCGC CGGAGTCGAG CCGCTGGCCC ATCCGGTGGC CGCTGTCGAG
GACATCACGC TGCGCCTGCG CGACGACGTG GCAAGCGAAC CCGACAACCG CGAAGCCAAC
CAGAAGAGCG CCCCGGCCGT CGAAGCCGGC CTGTTCCTCG TGCCGAAGGT GATCGAATGA
 
Protein sequence
MSLSASDIAR IASLARLQLA SDESERMLSQ INGFFDLVER MRSVDTAGVE PLAHPVAAVE 
DITLRLRDDV ASEPDNREAN QKSAPAVEAG LFLVPKVIE