| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0277 |
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| Symbol | |
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| ID | 7972626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 297883 |
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| End bp | 298686 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644790880 |
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| Product | exodeoxyribonuclease III Xth |
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| Protein accession | YP_002942206 |
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| Protein GI | 239813296 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0273673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCAAAC TGACCAGCCT CAATCTCAAT GGCCTGCGTT CGGCCGCCAC GAAGGGGGTG
GCGGACTGGG TGGCCGAACT TGCGCCGGAT TGTATTTGCA TGCAGGAGAT CCGGGTGCAG
GCGAGCGACA TCGAAGGCCG TTTCGAGGAA ATGGCCGGCC TCAAGGGCCA TTTCCATTTC
GCCGAGAAAA AAGGCTACGC CGGCACCGCG ATCTACACCC GCCACGCGCC GAGCGCCGTG
GTGGTGGGCT GGGGCGATGC CGAATTCGAC GCCGAGGGCC GCTATCTCGA ACTGCGCTTC
GACACGCCCC GGCGCAAGCT CTCGATCATC AGCTGCTACT TCCCGAGCGG CAGTTCGGGC
GAAGAGCGGC AGGAAGCCAA GTTCCGCTTC CTGAAGGGCT TCTTTCCGCA CCTCACCGCG
CTCAAGAAGG AGCGCGAATT CATCCTTTGC GGCGACATCA ACATCGCCCA CAAGGAAATC
GACCTCAAGA ACTGGCGCGG CAACCAGAAG AACAGCGGCT TCCTGCCCGA GGAGCGCGCC
TGGATGACCC GGCTGCTGGA CGCCGGCGCC GACGGCGCGG GCCTGGTCGA CGTCTACCGC
CTGCTCAAGC CCGACACCAC GGGCGAGGCC TACACCTGGT GGAGCAACCG CGGCCAGGCC
TACGCGAACA ACGTGGGATG GCGGCTGGAC TACCACCTGG CCACGCCGGC CCTGGGCGCG
CTCGCGCGCA GCGAGCAGAT CTACAAGACC ATCAAGTTCA GCGACCACGC GCCGATCACG
GTGGACTACG ACTTCACGCT GTAG
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| Protein sequence | MFKLTSLNLN GLRSAATKGV ADWVAELAPD CICMQEIRVQ ASDIEGRFEE MAGLKGHFHF
AEKKGYAGTA IYTRHAPSAV VVGWGDAEFD AEGRYLELRF DTPRRKLSII SCYFPSGSSG
EERQEAKFRF LKGFFPHLTA LKKEREFILC GDINIAHKEI DLKNWRGNQK NSGFLPEERA
WMTRLLDAGA DGAGLVDVYR LLKPDTTGEA YTWWSNRGQA YANNVGWRLD YHLATPALGA
LARSEQIYKT IKFSDHAPIT VDYDFTL
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