| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0263 |
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| Symbol | |
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| ID | 7972612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 283388 |
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| End bp | 284776 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790866 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002942192 |
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| Protein GI | 239813282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.464987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATC CGGAGTTCAT GTCTGCCCAG CCCGCCGAAA CCTCCACCGC CCCTTCCCTG
CCCTGGCGCG ATGCGCTGAA GGTCTACCTC GAGCCCGCCA CGCTGCGCAT GCTTGCGCTG
GGCTTTTCCG CCGGCCTGCC GCTGCTGCTG GTGCTGGGCA CGCTGAGCTT TCGGCTGCGC
GAGGCGGGCA TCGACCGCAC CACCATCGGC TACCTGAGCT GGGTGGGCCT GGCCTATGGC
TTCAAGTGGG TCTGGGCGCC GCTGGTCGAC CGGCTGCCGC TGCCGCCGCT GACCACGCTG
CTCGGGCGCC GGCGCGGCTG GCTGCTGCTG GCGCAGGGGA TGGTGGTCGC GGGGCTGGTC
GGCATGGCGC TCAACGATCC GCGCCAGGGC CTCGCGCCGC TGATCTGGTG CGCGCTGCTG
GTGGCCTTCG GCTCGGCCAC GCAGGACATC GCGCTGGACG CCTTCCGCAT CGAGTCGGCC
GAAACGCGCA AGCAGGCCGC GCTCGCCGCC GCCTATCAAA CGGGCTACCG CCTGGCGATG
ATCTGGGCCG GCGCCGGTGT GCTGTGGGTG GCGGCCTGGG CCGAGGTGGC GCCGGCAGCA
GCGGCCGCCA CGGGCGCGGC GGCCTACCAG AACGGCGCGT GGAAGACGGC CTACCTGGTG
ATGGCGGCCT CGATGGCGGT GGGCGTGCTG ACCGTGCTGC TCTCGCCCGA GCCGGTGCGC
CGCGTGCTGC CCAAGCCGAA GAACGCGGCC GAATGGCTGC AAAGCGTGCT GATCGAGCCC
TTTGCCGACT TCATCCGCCG CTACAAGTGG CAGGCCGCGC TGATCCTCTC GCTGATTGCC
ATCTACCGCA TCAGCGACGT GGTGATGGGC ATCATGGCCA ACCCCTTCTA CGTGGACATG
GGCTTCACCA AGGACGAGGT GGCCACGGTC AGCAAGATCT ACGGCGTGGT CATGACGCTG
GCCGGCGCCT TCGTGGGCGG CGTGCTGTCG ATGCGGCTGG GCGTGATGCG CGTGCTGATG
CTGGGCGCGG TGCTGAGCGC GGCGAGCAAC CTGCTCTTTG CCTGGCTGGC CTCGCGCGGG
CACGACCTGA CGGCGCTGAT CGCGGTGGTG TCGGCCGACA ACCTGGCCGG CGGCATTGCC
TCGGCGGCCT TCATCGCCTA CCTGTCGAGC CTCACGAACA TCAGCTATTC GGCCACGCAG
TACGCGCTGT TCAGCTCGCT GATGCTGCTG CTGCCCAAGT TCATTGCCGG CTATTCGGGC
GCTTTTGTCG ATGCGCACGG CTACGCCCAG TTCTTCACCG GCACCGCGCT GCTGGGCCTG
CCGGTGCTGC TGCTGGTGGC GCTGGCCGCC CGCATCACCA CCACCAAGGC GCCGGCCGGG
CGTCAATAG
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| Protein sequence | MDNPEFMSAQ PAETSTAPSL PWRDALKVYL EPATLRMLAL GFSAGLPLLL VLGTLSFRLR
EAGIDRTTIG YLSWVGLAYG FKWVWAPLVD RLPLPPLTTL LGRRRGWLLL AQGMVVAGLV
GMALNDPRQG LAPLIWCALL VAFGSATQDI ALDAFRIESA ETRKQAALAA AYQTGYRLAM
IWAGAGVLWV AAWAEVAPAA AAATGAAAYQ NGAWKTAYLV MAASMAVGVL TVLLSPEPVR
RVLPKPKNAA EWLQSVLIEP FADFIRRYKW QAALILSLIA IYRISDVVMG IMANPFYVDM
GFTKDEVATV SKIYGVVMTL AGAFVGGVLS MRLGVMRVLM LGAVLSAASN LLFAWLASRG
HDLTALIAVV SADNLAGGIA SAAFIAYLSS LTNISYSATQ YALFSSLMLL LPKFIAGYSG
AFVDAHGYAQ FFTGTALLGL PVLLLVALAA RITTTKAPAG RQ
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