Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0235 |
Symbol | |
ID | 7971444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 251832 |
End bp | 252629 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644790838 |
Product | aldolase II superfamily protein |
Protein accession | YP_002942164 |
Protein GI | 239813254 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAA CACTCGCCAC CCGCGTGCCG CCATCGGCTC CGGTCCATCC CTCGATCCAT CCGGACGAAC GCGCCGCGCG CGAGCAGCTT GCGGCCTGCT ACCGCGTGTT TGCGATGCTG GGCTGGACCG AGATGATCTA CAACCACATC ACGGTGCGGC TGCCCGACAG CGTGACGGGC GGGGAGAAGC AGTTCCTCAT CAACCCCTTC GGCCTGCACT ACAGCGAAGT GACGGCCAGC AACCTGGTGA AGATCGACCT GCAGGGCAAG GTGCTCGACG GCTCGGCCTG GCCGGTGAAT CCGGCCGGCT TCACGGTGCA CGCCGCCATC CACGACGGCC TGCCCGGCGC GCACTGCGTG ATGCACACGC ACACCACGGC CGGCGTGGCC GTGGCCTGCC TGCAGGGCGG CCTGCAGCAG ACCAATTTCT ATACCGCGCA GTTGCACGGC ATGGTGGCCT ACCACGACTT CGAGGGCATC ACCATCCATG CCGACGAGGG CCCGCGCCTG CTCAGGAGCA TCGGCGACCG CAACGCCGTG ATCCTGCGCA ACCACGGCCT GCTGGCCTGG GGGCAGACGC TGCCGCAGAC CTTCGCCATC CTCTGGACGC TGCAGCGCGC CTGCGAGATC CAGATGGCCA CCTTCTCGAT GGGGGCGGCC ATTCCCGTGA GCGAGGAGAT CGCGCAGCGC TGCACGCGCG ACGCGCTGCA GTTCAGCCCC GAGCATGGCG CGGGGCAGGA CGTGTTCGAT GCGCTGGTGC GCCAGGTCGA CCGCATCGAC GCCAGCTACA AGAACTGA
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Protein sequence | MNTTLATRVP PSAPVHPSIH PDERAAREQL AACYRVFAML GWTEMIYNHI TVRLPDSVTG GEKQFLINPF GLHYSEVTAS NLVKIDLQGK VLDGSAWPVN PAGFTVHAAI HDGLPGAHCV MHTHTTAGVA VACLQGGLQQ TNFYTAQLHG MVAYHDFEGI TIHADEGPRL LRSIGDRNAV ILRNHGLLAW GQTLPQTFAI LWTLQRACEI QMATFSMGAA IPVSEEIAQR CTRDALQFSP EHGAGQDVFD ALVRQVDRID ASYKN
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