| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0232 |
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| Symbol | |
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| ID | 7971441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 248998 |
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| End bp | 249954 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790835 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002942161 |
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| Protein GI | 239813251 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCAA AGCAGGTGCT CGGCACCGCC TCCGGTGCAT GGGGCGAGAG GAGGTGGGCC
GGCGTCGGCG CCGCCGAGGT CATGCTGCTG GCTGTGGCGG CGGTGTGGGG CGGCAGCTAC
GCGGTGGCCA AGCAGGCCAC GCAGCAGCTG CCCGTGCTGG AGTTCATTGC GCTGCGCTTC
GGGCTGACAT TCGTCGTGCT GCTGCCGGCG CTCAGGCCGC TGTTCGATGC GCAATGGCGG
CAAGGCCTCG CGGTGGGCGG CCTGCTCGGC GCCAACCTGC TGGCGATCTT CGTCTGCGAG
ACCTTCGGTG TGTCGCTCAC TGCGGCGAGC AACGCCGCAT TCCTGATCAG CCTGTGCGTG
GCGCTCACGC CCTTTGTCGA ATGGTGGCTG CTCGGGCGGC GGCCGGAGCC GCGCATGTTC
TGGGCGGCGG GCCTGTCGGC GGTGGGCGCC GCGATGCTGT CGGCCACTTC GCCCGCCAGC
ATCTCGGTGG GATGGGGCGA TGGCCTGATG GTGATTGCGG CCTTCCTGCG CGCCGTGATG
GTGTGCATGA CGCGGCGGTT CGCTGGCCGC CATTCGATGC CGGCGCTGAC GCTGACCGCC
GTGCAGTCGG GCATGATGGC GCTCGGCGCG ATGGCGCTGT CGCTCGTCGC GTCGAAGGGC
GCATGGCACA TGCCGCCCGC CACGGCCTCC TTCTGGTGGG GCATGGCGTA CCTCGTGCTC
CTGTGTACGG TTTTCGCGTT CTTCGCGCAG AACCATGCGG CTTCGCATTC GAGTCCGAGC
CGGGTGTCGC TGCTGATGGG AAGCGAGCCG GTGTTCGGGG CCTTGATCGC GGTGTACGGG
TTCGGGGAGA CGGTCGGGGC CTGGGGCTGG GCCGGTGGAT TGCTGATCGT GATGGCGGCT
TGGTGGGTGA CGATGCCGCA GTCCACCGCG CCGCGTGCGC ATTCCGTGAA TTTGTAG
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| Protein sequence | MDSKQVLGTA SGAWGERRWA GVGAAEVMLL AVAAVWGGSY AVAKQATQQL PVLEFIALRF
GLTFVVLLPA LRPLFDAQWR QGLAVGGLLG ANLLAIFVCE TFGVSLTAAS NAAFLISLCV
ALTPFVEWWL LGRRPEPRMF WAAGLSAVGA AMLSATSPAS ISVGWGDGLM VIAAFLRAVM
VCMTRRFAGR HSMPALTLTA VQSGMMALGA MALSLVASKG AWHMPPATAS FWWGMAYLVL
LCTVFAFFAQ NHAASHSSPS RVSLLMGSEP VFGALIAVYG FGETVGAWGW AGGLLIVMAA
WWVTMPQSTA PRAHSVNL
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