| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0167 |
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| Symbol | |
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| ID | 7971376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 169422 |
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| End bp | 170468 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790770 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_002942096 |
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| Protein GI | 239813186 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCCG TCATCTATAC CCGCGGCCAG GCGCTTGCCG GCATCCTCGA AAAGCGCATC
GCCATCCTCG ATGGCGCGAT GGGCACGATG ATCCAGCGCT TCAAGCTCAC CGAGGAACAG
TACCGCGGCG AGCGCTTCAA GGACTTCGAG CGCGACGTCA AGGGCAACAA CGAGCTGCTC
TCGCTGACGC GGCCCGACGT GATCCGCGAC ATCCACGAGG GCTACCTCGC GGCCGGCGCC
GACCTGATCG AAACCAACAC CTTCGGCGCG ACCACCATCG CGCAGGAGGA CTACAGGATG
GCGCACCTCG CCCGCGAGAT GAACCTCGAA TCGGCAAAGC TCGCGCGTGC GGCCTGCGAC
AAGTTCAGCA CGCCCGACAA GCCGCGCTTC GTGGCCGGCG CCCTCGGCCC GACGCCCAAG
ACCGCGAGCA TCAGCCCCGA CGTGAACGAC CCCGGCGCGC GCAACGTCGA CTTCGAGCAA
TTGCGCGCGG CCTACTACGA GCAGACCGAG GCACTGGTCG AGGGCGGCGC CGACGTGATC
CTGGTCGAGA CCATCTTCGA CACGCTCAAT GCCAAGGCCG CGCTGTTCGC GGTCGACGAG
TATTTCGACA ACAGCGGCCA GCGCCTGCCG CTGATCATCA GCGGCACTGT GACCGACGCC
TCGGGCCGCA TCCTGAGCGG CCAGACCGTC ACCGCGTTCT GGCACAGCGT GCGCCATGCG
CAGCCGCTGG CCATCGGGCT CAACTGCGCG CTGGGCGCGG CGCTGATGCG GCCCTACATC
CAGGAACTGG CGAAGGTGGC GGGCGACACC TTCATCAGCT GCTATCCGAA CGCGGGCCTG
CCCAATCCGA TGAGCGAGAC CGGCTTCGAC GAGACGCCCG ACGTCACCTC GCGGTTGCTG
CACGAGTTCG CGGCCGAAGG GCTGGTCAAC ATCGTGGGCG GCTGCTGCGG CACCACGCCG
GACCACATCG CGGCCATCGG CAAAGCCGTG GCGCCGATGA CAGGCCGGCT GTTGAACAAC
AACGGCTTCT ACCGCGAAGC AGCCTGA
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| Protein sequence | MKPVIYTRGQ ALAGILEKRI AILDGAMGTM IQRFKLTEEQ YRGERFKDFE RDVKGNNELL
SLTRPDVIRD IHEGYLAAGA DLIETNTFGA TTIAQEDYRM AHLAREMNLE SAKLARAACD
KFSTPDKPRF VAGALGPTPK TASISPDVND PGARNVDFEQ LRAAYYEQTE ALVEGGADVI
LVETIFDTLN AKAALFAVDE YFDNSGQRLP LIISGTVTDA SGRILSGQTV TAFWHSVRHA
QPLAIGLNCA LGAALMRPYI QELAKVAGDT FISCYPNAGL PNPMSETGFD ETPDVTSRLL
HEFAAEGLVN IVGGCCGTTP DHIAAIGKAV APMTGRLLNN NGFYREAA
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