| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0159 |
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| Symbol | |
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| ID | 7971695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 161135 |
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| End bp | 162853 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790762 |
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| Product | urocanate hydratase |
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| Protein accession | YP_002942088 |
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| Protein GI | 239813178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2987] Urocanate hydratase |
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| TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC CCGAAAAGCT CCCGCTGCAA AACACCGACC CGCGCCACGA CCCGACGCGC
GTGATCCGCG CCCCGCGCGG CAGCACGCTC AACTGCAAGA GCTGGCTCAC CGAGGCGCCT
TACCGCATGC TGCAGAACAA CCTCGACGCC GAGGTGGCAG AGCGTCCGCA GGACCTCGTG
GTGTACGGCG GCATCGGCCG CGCCGCGCGC AACTGGGCCT GCTACGACCA GATCCTCGCG
TCGCTGAAGG AACTGAACGA CGACGAGACG CTGCTCATCC AGTCGGGCAA GCCGGTCGGC
GTGTTCAAGA CGCATGAGAA CGCGCCGCGC GTGCTGCTCG CCAACTCGAA CCTCGTGCCC
AAGTGGGCCA ACTGGGAGCA CTTCAACGAG CTCGACCGCC AGGGCCTCTT CATGTACGGC
CAGATGACGG CCGGCAGCTG GATCTACATC GGCAGCCAGG GCATCGTGCA AGGCACCTTC
GAAACCTTCG TCGAAGCCGG CCGCCAGCAC TACAACAACA GCCTCGCGGG CAAGTGGATC
CTCACGGCCG GCTTGGGCGG CATGGGCGGC GCGCAGCCGC TCGCGGCCAC GCTCGCGGGC
GCGGTGTCGC TCAACATCGA GTGCCAGCAG ACCAGCATCG ACTTCCGCCT GCGCACGCGC
TATGTCGACA AGCAGGCGCG CGACATCGAC CATGCGCTCG AGCTCATCCA GCAGCACTGC
GACGCGAAGG AAGCCGTGTC GATCGCGCTG CTCGGCAACG CGGCCGACAT CCTGCCCGAG
CTCGTGAAGC GCGCCAAGGC CGGCGGCATC AAGCCCGACC TCGTGACCGA CCAGACCTCC
GCGCACGACC TGATCAACGG CTACCTGCCT TCGGGCTGGA GCGTTGCGCA ATGGCAGGCC
GCGATGAAGG ACGTCTCGCA GCACGACGCG CTCAAGAAGG CCGCCGCCAA GTCGTGCGCC
GTGCACGTGC AGGCCATGCT CGACTTCCAG GCCATGGGCA TCCCCACGGT CGACTACGGC
AACAACATCC GCCAGGTCGC CTTCGACGAG GGCGTGCAGA ACGCCTTCGA CTTCCCGGGC
TTCGTGCCGG CCTACATCCG CCCGCTGTTC TGCGAAGGCA AGGGCCCGTT CCGCTGGGTG
GCGCTCTCGG GCGACCCCGA AGACATCTAC AAGACCGACG CCAAGATCAA GGAGCTGTTC
CCCGAGAACA CCCACACGCA CCGCTGGCTC GACATGGCGC GCGAGCGCAT CGCCTTCCAG
GGCCTGCCGG CGCGCATCTG CTGGCTGGGC CTGGGCGAGC GCCACATCGC CGGCCTGGCC
TTCAACGAGA TGGTGAAGAA CGGCGAACTC AAGGCACCCA TCGTCATTGG CCGCGACCAC
CTCGACACCG GCTCGGTGGC GAGCCCCAAC CGCGAGACCG AGGCCATGAA GGACGGCACC
GATGCGGTGA GCGACTGGCC GCTGCTCAAC GCGCTGCTCA ACACCGCGGG CGGCGCCACC
TGGGTCAGCC TGCACCATGG CGGCGGCGTG GGCATGGGCT ATTCGCAGCA CTCGGGCGTG
GTGATCGTGT GCGACGGCAC CGAGGCCGCC GCCAAGCGCA TCGAGCGCGT GCTCTGGAAC
GACCCGGCCA CCGGCGTGAT GCGCCATGCG GACGCGGGCT ACGACATTGC CGTGGCCACG
GCGAAGAAGC AGGGCCTCAA TCTGCCGATG GTGCGCTGA
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| Protein sequence | MNAPEKLPLQ NTDPRHDPTR VIRAPRGSTL NCKSWLTEAP YRMLQNNLDA EVAERPQDLV
VYGGIGRAAR NWACYDQILA SLKELNDDET LLIQSGKPVG VFKTHENAPR VLLANSNLVP
KWANWEHFNE LDRQGLFMYG QMTAGSWIYI GSQGIVQGTF ETFVEAGRQH YNNSLAGKWI
LTAGLGGMGG AQPLAATLAG AVSLNIECQQ TSIDFRLRTR YVDKQARDID HALELIQQHC
DAKEAVSIAL LGNAADILPE LVKRAKAGGI KPDLVTDQTS AHDLINGYLP SGWSVAQWQA
AMKDVSQHDA LKKAAAKSCA VHVQAMLDFQ AMGIPTVDYG NNIRQVAFDE GVQNAFDFPG
FVPAYIRPLF CEGKGPFRWV ALSGDPEDIY KTDAKIKELF PENTHTHRWL DMARERIAFQ
GLPARICWLG LGERHIAGLA FNEMVKNGEL KAPIVIGRDH LDTGSVASPN RETEAMKDGT
DAVSDWPLLN ALLNTAGGAT WVSLHHGGGV GMGYSQHSGV VIVCDGTEAA AKRIERVLWN
DPATGVMRHA DAGYDIAVAT AKKQGLNLPM VR
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