| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0150 |
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| Symbol | |
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| ID | 7971686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 148605 |
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| End bp | 150932 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790753 |
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| Product | AAA ATPase central domain protein |
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| Protein accession | YP_002942079 |
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| Protein GI | 239813169 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.172395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAGC GTGCGGGTGT CGATGTAGTG GCTGCTGCGG TACGCGGGCA GGCATTGCCG
TCGCCTGGGC TCAAGGGTGC GCCGGTGCTC GAACTCATGT GCTCGCACTT CGTGCTCACG
CTGGCCGCCA AGCAGGGGCC GCGCTTCAAC GTGCGCCGCG ACATCAACGG CCTTCTCTCG
CTCACCGGCC GCCACCTGGT GTGGCCGGCC GCGGTGCTGC AGCGGCTGCG CGAATTCCTG
GGCCGGCGCT GCGCCGGCAA CGAGGCCTGG AAGGGCGTCG AGAATTTCGA CGGCCGCACG
CTGCTCGAGC GCCATGGCGT GTGGCGCGGA CCCTACGAGG AAGGCACACT GTTCTTCTAC
CTCGACGAAT ACGCCAAGGA CTACCCCAAG GACCTGCTCT CGGTGCTGGC CGTCACGCGC
GACTGGCTCA CGCATGCGCT GCGCAAGCAG TCGACGTTGG TCGAGAAGAA CATCGACGCG
CTCGCGGGCC TCCTGCAGCT CAACAAGGCC GAACGCGCGC TGCTGCTCTA CGGCACGCTC
GCGCGCTACC AGCGCGACCT GCGCTCGCTG CTGGTCGAGT TCAAGGTCAA CAACGCGCCC
GAGGCCTATG CCGCCATTGC CGACATTGCG GGCGTCAACG CCACCGAAGT GGGCGAGGCC
CTGCGTGCCG GTTCGCGGCT GGAGCGCATC GGCCTGGTCG AGAACCTGAT CTCCGAGCAC
AACATCACCG ACCTGGCCGA CCTCATGAAG GTCAGCGAGA AGCTGCCGCC GGTGCTGATG
CGCGAGTACC GCGACCACAA CGAACTGATG GCCGTGTTCA CGCGGCCCTC GGCCAAGAGC
GCGCTCACCA CGCACGACTT CTCCTTCGTC GAGGAAGACG CGCAGATGCT CGTCACGCTG
CTGCGCGCCG CGGTGGCGCG CAAGGAGCCC GGCGTCAACG TGCTGCTCTA CGGGCCGCCC
GGCACCGGCA AGACCGAGCT CGCCAAGGTG GTGGCGCAGG CGGCGGGCCT GGAGCTGTTC
GAGGTCGAAT ATGCCGACCG CGACGGCAAC TCGCTGAGCG GCCGCGACCG CTACCGCTCG
CTGCAGATCG CGCAGGTGTT CCTCAAGGGC AGCGCGCAGG CCGCGCTGCT GTTCGACGAG
GTCGAGGACG TGTTCCCGCC CATCAGCACC GAGGCCGCGC AGTTCATGGC GCGCGCCGAG
CAGATTCCGG CGCCCACCAG CGGCAGCGTG AGCGGCAAGG CCTGGGTCAA CCAGATCCTC
GAGGCCAACC CCGTGCCCAC GCTGTGGGTC ACCAACCGCA TCGAGCAGAT CGACCCGGCG
TTCCGGCGCC GCTTCGCCTA CCACCTGGAG CTCAAGTCGC CGCCGCCCGG TGCGCGCGAG
CAGCTCGTGA AGAAGACGCT CGAAGGCATC GTCGTGTCCG AGGCCTTCAC CGCCAAGCTG
GCCGAGCGCA AGGGCCTCAC GCCCGCGCAG ATCCGCACCG CGGTGCGCTT TGCGGGGCTC
GCGCAGACGG AGGACGGCGC CTCGATGGAA GCGCTGATCG AGCGCCAGCT CAAGAACGCC
GACCTCGCGC TCGGCACGCT CGACACCGGC CCGGGCGAGC GGCGCAGCGT CACCACCTAC
GACCTCGACA TGCTCAACGT CGAGACCCGC TTCGAGATCC CGCGCATCGT GGCGGCCATC
AAGGCGCGCG GCCACGGCAC GCTGTGCTTC TACGGCGCAC CCGGCACCGG CAAGACCGCG
CTGGCCGAGC ACATCGCCAA GGCCATCGGC CGGCCGCTGA TCATCAAGCA GGCCAGCGAC
CTCATGAGCA AGTACGTCGG CGAGACCGAG CAGAACATGG CCGCCATGTT CAAGGAAGCC
GAGGCCGAGA AGGCCGTGCT GCTGCTCGAC GAGGCCGACA GCTTCCTGCA GGACCGGCGC
GGCGCGCAGC GCACCTACGA AGTGACCGAG GTCAACGAGA TGCTGCAGGG CATGGAGCGC
TTCAACGGCG TCTTCATCTG CACCACCAAC CTGCTCGACC GGCTCGACCA GGCGGCGCTT
CGGCGCTTCA CCTTCAAGAT CAAGTTCATG CCGCTCACCG CCCCGCAGCG CGAGCGCATG
TTCGTGACCG AGGCGCTGGC GGGCGACGCC GCGCTGCTCA CCGCAGGCAT CAAGGCGCGG
CTGGCGCAAT TGCAGCAGCT GTGCCCGGGG GATTTCGCGG CCGTGAAGCG GCAGACGGAT
ATTCTTGCGG TCGAGTTCTC GGCTGCCGAA TTCCTGGACC AGCTCGAGGC CGAGCACCGC
ATCAAGCCCG AGGTGCGCGA ATCGCGCGGC ATCGGCTTCA TGCAATAG
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| Protein sequence | MVKRAGVDVV AAAVRGQALP SPGLKGAPVL ELMCSHFVLT LAAKQGPRFN VRRDINGLLS
LTGRHLVWPA AVLQRLREFL GRRCAGNEAW KGVENFDGRT LLERHGVWRG PYEEGTLFFY
LDEYAKDYPK DLLSVLAVTR DWLTHALRKQ STLVEKNIDA LAGLLQLNKA ERALLLYGTL
ARYQRDLRSL LVEFKVNNAP EAYAAIADIA GVNATEVGEA LRAGSRLERI GLVENLISEH
NITDLADLMK VSEKLPPVLM REYRDHNELM AVFTRPSAKS ALTTHDFSFV EEDAQMLVTL
LRAAVARKEP GVNVLLYGPP GTGKTELAKV VAQAAGLELF EVEYADRDGN SLSGRDRYRS
LQIAQVFLKG SAQAALLFDE VEDVFPPIST EAAQFMARAE QIPAPTSGSV SGKAWVNQIL
EANPVPTLWV TNRIEQIDPA FRRRFAYHLE LKSPPPGARE QLVKKTLEGI VVSEAFTAKL
AERKGLTPAQ IRTAVRFAGL AQTEDGASME ALIERQLKNA DLALGTLDTG PGERRSVTTY
DLDMLNVETR FEIPRIVAAI KARGHGTLCF YGAPGTGKTA LAEHIAKAIG RPLIIKQASD
LMSKYVGETE QNMAAMFKEA EAEKAVLLLD EADSFLQDRR GAQRTYEVTE VNEMLQGMER
FNGVFICTTN LLDRLDQAAL RRFTFKIKFM PLTAPQRERM FVTEALAGDA ALLTAGIKAR
LAQLQQLCPG DFAAVKRQTD ILAVEFSAAE FLDQLEAEHR IKPEVRESRG IGFMQ
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