| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0149 |
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| Symbol | |
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| ID | 7971685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 147268 |
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| End bp | 148497 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790752 |
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| Product | threonine dehydratase |
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| Protein accession | YP_002942078 |
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| Protein GI | 239813168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.436735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCA TGGTCGGAAT CGAAGAAATC CGGCGCGCCG CGGCGCGTCT CGAGGGTCAG
GTGCTCAACA CGCCCTGCGT CGAATCGCGC ACGCTCTCCG AGATCGTGGG CGCGCAGGTC
TACCTGAAGT TCGAGAATCT GCAGTTCACA TCCTCGTTCA AGGAGCGGGG GGCGTGCAAC
AAGCTGGTCG ATCTCCTGGA GGCCGACACG CGCGACGGCC AGGAAGCGAC GCGGGGCGTG
GTGGCCATGT CGGCCGGCAA CCATGCCCAG GGCGTGGCCT ACCACGCGCA GCGGCTCGGC
CTGCGCGCGC TCATCGTGAT GCCGCGCTTC ACGCCTGGCG TGAAGATCGA GCGCACGCGC
GGCTTCGGCG CCGAGGTGGT GCTGCACGGC GACACGCTCG ACGCAGCGCG CGCGCATGCG
CTGGAGCTGG CCGAACGCGA GGGGCTGACC TTCGTCCACC CCTACGACGA CGAGGCCATC
ATCGCGGGCC AGGGCACGGT GGCGCTCGAA ATGCTCGATG CGGTGCCCGA TCTCGACACG
CTGGTGGTGT CGGTCGGCGG CGGCGGGCTG ATCGCGGGCA TGGCGATCGC GGCGCGCGAG
CGCAAGCCCG GCATCGAGAT CGTCGGCGTG CAGACCACGC GCTTTCCGGG CATGGTGAAT
GCCGTCAAAG GCACCCAGCA CCTGCAGGGC AAGAGCACCA TCGCCGAAGG GATCGCGGTC
GGAACGCCCG GCGTGCTGAC GCGCGAGATC ATCGCCCAGC ACGTGGACGA CCTGCTGCTG
GTCGACGAAG GCGACATCGA GCAGGGCGTG CTGATGCTGC TCGAGATCGA GAAGACCCTG
GTCGAGGGCG CAGGCGCGGC CGGCCTGGCG GCGCTGATCC GGCATCCGGC GCGCTTCAAG
GGCAAGCGCG TGGGCCTGGT GCTGTCGGGC GGCAACATCG ACCCGCTGCT GCTGGCGGCC
ATCATCGAAC GCGGCATGGT GCGGGCCGGC CGGCTGGCGC GCGTGCGCGT GAGTGCGCGC
GACGTGCCGG GCTCCTTGGC CCAGATCACG GCCACTGTGG CAGAAGCGGG CGCTAACGTC
GATGAGGTTC ATCATCAAAG AGCGTTTACC ATGCTGGCAG CCCAGAACGT CGACATCGAG
CTGGTGCTGC AGACCCGCGG GCGGGCCCAC CTGGCCAGCG TGCTGGGCGC ATTGCACGAC
GCCGGCTTCG AGGCCGAGGA GCAGCACTGA
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| Protein sequence | MPAMVGIEEI RRAAARLEGQ VLNTPCVESR TLSEIVGAQV YLKFENLQFT SSFKERGACN
KLVDLLEADT RDGQEATRGV VAMSAGNHAQ GVAYHAQRLG LRALIVMPRF TPGVKIERTR
GFGAEVVLHG DTLDAARAHA LELAEREGLT FVHPYDDEAI IAGQGTVALE MLDAVPDLDT
LVVSVGGGGL IAGMAIAARE RKPGIEIVGV QTTRFPGMVN AVKGTQHLQG KSTIAEGIAV
GTPGVLTREI IAQHVDDLLL VDEGDIEQGV LMLLEIEKTL VEGAGAAGLA ALIRHPARFK
GKRVGLVLSG GNIDPLLLAA IIERGMVRAG RLARVRVSAR DVPGSLAQIT ATVAEAGANV
DEVHHQRAFT MLAAQNVDIE LVLQTRGRAH LASVLGALHD AGFEAEEQH
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