| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0131 |
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| Symbol | |
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| ID | 7971667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 130599 |
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| End bp | 131630 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644790734 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_002942060 |
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| Protein GI | 239813150 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CCCCGCCTTC TTCCCCCGTG ACCATCCGCG ACGTTGCCCG CGCGGCCGGC
GTGCATGTGT CGACGGTGTC GCGCGCGCTC AGCCCCGAGA AGCGCTCGCT GATCAGCGAC
GAGGTGCTGC GCGTGGTGGA GGAGGCCGCG CAGCGCCTGG GCTACCGGCC CAACCGCGCG
GCCTCGGCGC TGCGCACGGG CCGCACCCAC ACCATCGGCG TGCTGGTGCC CGACATCACC
AACGCGGTGT TCCCGCCGAT CCTGCAGGGC ATCGAGGCCA GCGCGGCGGC GCGCGGCTAC
TTCGTGTTCG TGACCAACGT GGTCGACCCC GCGCTCGCGC GGCCGGTGCT CGAGCGCATG
CTGGCGCAGC GCGTCGACGG CGTGATCCTG GCCACCGCTA CGCGCGACGA TCCGCTGGTC
GACTTCGTCG CCAAGGCCGG CATGACGGCG GTGCTGGTCA ACCGCGCCGA CGAGACCGGC
CGCCTGCCGG CCGTGGTGAG CGACGACCGG CTCGCGATGA AGCTCGCGGT CGACCACCTC
GTGGGCCTGG GCCACAAGCG CATCGCGCAC CTGGCCGGGC CGCAGAACAT TCCCACCGGC
GTGGGCCGGC GCCTGGGCCT GGAGCAGGCG CTGCGCGACC ACCGAATGAA GCCGCTGCGC
GTGGTCGAGT GCGAAAGCTA CAGCCGCGAG GCCGGCGCGG CCGCCATGCG GCAGATGCTC
GAGGCCGGCC CGGCTCCGCA GGCCGTGGTG TGCTGCAACG ACCTCGTGGC GCTGGGCGCC
TACGACGCAC TGCGCGAGGC CGGCCTGCGC GTGCCGAAGG ACATCTCGGT CACCGGCCAC
AACGACATGC CGCTGGTCGA CATGGTCGAC CCGCCGCTCA CCACCATCCG CCTGCCGCAC
CGCGAGCTCG GCTGGCGCGC GGCCGAGATG CTGTTCGAGG AGATCGACGG CCGCGCCATG
TCGGCATCGA CCGTGGTGCT GCGGCCCGAG CTCGTGGTGC GCAAGTCGAC CGGCGCGCCT
TCCGTGCGCT GA
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| Protein sequence | MSTTPPSSPV TIRDVARAAG VHVSTVSRAL SPEKRSLISD EVLRVVEEAA QRLGYRPNRA
ASALRTGRTH TIGVLVPDIT NAVFPPILQG IEASAAARGY FVFVTNVVDP ALARPVLERM
LAQRVDGVIL ATATRDDPLV DFVAKAGMTA VLVNRADETG RLPAVVSDDR LAMKLAVDHL
VGLGHKRIAH LAGPQNIPTG VGRRLGLEQA LRDHRMKPLR VVECESYSRE AGAAAMRQML
EAGPAPQAVV CCNDLVALGA YDALREAGLR VPKDISVTGH NDMPLVDMVD PPLTTIRLPH
RELGWRAAEM LFEEIDGRAM SASTVVLRPE LVVRKSTGAP SVR
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