Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0120 |
Symbol | |
ID | 7971656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 121015 |
End bp | 121452 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644790723 |
Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_002942049 |
Protein GI | 239813139 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.333418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGACC CGATACACAG CCCGCCGTTC TCGGTGCTGC GCATCGATCA TGTCGTGCTG CGCGTGAAGG ACGCGGAGCG CGCCATTGCC TTCTACCGCG ACGTGCTCGG CTGCGCGGTC GAGAGGCGCC GCGACAACCT GGGGCTCGTG CATCTGCGCG CCGGCACCAA CCTCATCGAC CTCGTCACGC CCGATGGCCC GCTTGGCAAG CAGGGCGGCG CGCTGGCCGG CAAGGAAGGC CGCAACGTCG ACCATCTCTG CCTGCGCATC GAGCCCTTCG ACGAAGCGGC GATCCGCGCA TTGATGGCGC GGCACGGCGT GCCGGTGCAC GGCGAGGTGC AGAACAACTT CGGCGCCGAG GGCAATGGGC CTTCGATCTA CATCACCGAC CCTGACGGCA ACAGCGTCGA GCTCAAAGGG CCGGCAGGCA ACAGTTAG
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Protein sequence | MTDPIHSPPF SVLRIDHVVL RVKDAERAIA FYRDVLGCAV ERRRDNLGLV HLRAGTNLID LVTPDGPLGK QGGALAGKEG RNVDHLCLRI EPFDEAAIRA LMARHGVPVH GEVQNNFGAE GNGPSIYITD PDGNSVELKG PAGNS
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