| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0118 |
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| Symbol | |
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| ID | 7971654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 118547 |
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| End bp | 119746 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790721 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002942047 |
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| Protein GI | 239813137 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.360682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCA AAGCGCAATT CCACTGGGAC GATCCCCTTC TTCTCGACCA GCAGCTGACC
GACGAAGAAC GCATGATCCG CGACGCGGCC AATGCCTACT GCCAGGAGCG CCTCGCGCCC
CGCGTCATCG AGGGCTTTCG CAGCGGCGAG ACCGACCCCG CCATCTTCCG CGAAATGGGC
GCGCTCGGCC TGCTCGGCCC CACGATCCCC GAGCAGTACG GCGGCCCCGG CCTCAACTAC
GTGGCCTACG GCCTGATCGC GCGCGAAGTC GAGCGCGTCG ACTCGGGCTA CCGCTCGATG
GCCAGCGTGC AGAGCTCGCT CGTGATGGTG CCGATCAACG AATTCGGCAC CGAGGCGCAG
AAGCAGAAAT TCCTGCCCAA GCTCGCCACC GGCGAATGGA TCGGCTGCTT CGGCCTGACC
GAACCCGACC ACGGCTCCGA CCCCGGCAGC ATGGTCACGC GCGCCAAGAA GGTGCCGGGC
GGCTACTCGC TTTCCGGCGC CAAGATGTGG ATCAGCAACT CGCCCATCGC CGACGTGTTC
GTGGTCTGGG CCAAGGAAGT CAGCGAAAGC GGCACCGTGG GCCCGATCCG CGGCTTCGTG
CTCGAGAAGG GCACGAAGGG CCTGAGCGCT CCGGCGATCC ACGGCAAGGT CGGCCTGCGC
GCCAGCATCA CCGGCGAAAT CGTGATGGAC GGCGTGTTCT GCCCCGAGGA AAACGCCTTC
CCCGAAGTGC AGGGCCTCAA GGGCCCCTTC ACCTGCCTCA ACAGCGCGCG CTACGGCATC
TCCTGGGGCG CGCTCGGCGC CGCCGAAGAC TGCTGGCACC GCGCCCGCCA GTACACGCTG
GACCGCAAGC AGTTCGGCCG CCCGCTCGCC GCCAACCAGC TGATCCAGAA GAAGCTGGCC
GACATGCAGA CCGAGATCAC GCTGGGCCTG CAAGGGAGCC TGCGCCTGGG CCGCATGAAG
GACGAGGGCA CGGCCTCGGT CGAGATCACC TCGATCATGA AGCGCAACAA CTGCGGCAAG
GCCCTGGACA TCGCCCGCCT GGCGCGCGAC ATGATGGGCG GCAACGGCAT CAGCGACGAG
TTCGGCGTGG CGCGCCACCT GGTGAACCTG GAAGTGGTCA ACACCTACGA AGGCACGCAC
GACATCCACG CGCTCATCCT GGGCCGTGCC ATCACCGGCA TCGCCGCCTT CGCCAACTGA
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| Protein sequence | MAAKAQFHWD DPLLLDQQLT DEERMIRDAA NAYCQERLAP RVIEGFRSGE TDPAIFREMG
ALGLLGPTIP EQYGGPGLNY VAYGLIAREV ERVDSGYRSM ASVQSSLVMV PINEFGTEAQ
KQKFLPKLAT GEWIGCFGLT EPDHGSDPGS MVTRAKKVPG GYSLSGAKMW ISNSPIADVF
VVWAKEVSES GTVGPIRGFV LEKGTKGLSA PAIHGKVGLR ASITGEIVMD GVFCPEENAF
PEVQGLKGPF TCLNSARYGI SWGALGAAED CWHRARQYTL DRKQFGRPLA ANQLIQKKLA
DMQTEITLGL QGSLRLGRMK DEGTASVEIT SIMKRNNCGK ALDIARLARD MMGGNGISDE
FGVARHLVNL EVVNTYEGTH DIHALILGRA ITGIAAFAN
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