Gene Vapar_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0095 
Symbol 
ID7971630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp95235 
End bp96521 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content67% 
IMG OID644790697 
Productbenzoyl-CoA oxygenase/reductase, BoxA protein 
Protein accessionYP_002942024 
Protein GI239813114 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID[TIGR03224] benzoyl-CoA oxygenase/reductase, BoxA protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.841388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATGG CCGTTGAAGC CGGGGTCATC AAGCAGCACC TGATCGACCC CGAGATCTGC 
ATCCGCTGCA ACACCTGCGA GGCCACCTGC CCCGTCAACG CGATCACGCA CGACGACAAC
AACTACGTCG TGCGCGCCGA CATCTGCAAT GGCTGCATGG CCTGCATCTC GCCGTGCCCC
ACGGGCTCGA TCGACAACTG GCGCACCATG CCGCTGGTGC GTGCCTACAC GATCGAGGAA
CAGCTCAGCT GGGAATCGCT GCCCGCGGAG CTCACGCCCG AGGAGCTCGA GGCCGCGGGC
GTTTCCGCCT CCGAGGCCGG CGATGAAGCC GCGCCGGCTG CCGCGCCCGC ATCGAGCCAG
ACCGCCGTCG ACGCCATCGA GCCGGTCTTC AACTCGGCCC AGTACGGCGC CACCGTGCCG
CCCTGGTCGG CCGCGCACGC CTACACCAAC CTCTTTGCGC CGAAGTCGCC GACCACGGCC
ACCGTGGTGG GCAACTTCAA CTGCACCGAG GCGGGCTTCG ACAGCGAGAC CCACCACATC
GTGCTCGACT TCGGCGTGGT GCCGTTCCCG GTGCTCGAAG GCCAGTCGAT CGGCATCGTG
CCGCCGGGCG TCGATGCCAT CGGCAAACGC CACCATGCGC GCCAGTACTC GGTTGCGAGC
CCGCGCAACG GCGAGCGGCC CGGCTACAAC AACGTGTCGC TCACCGTGAA GCGCGTGACC
GAAGACCACC AGGGCGACCC GGTGCGCGGC GTGTGCTCCA ACTACGTCTG CGACCTGAAG
GTCGGCGACA CGGTGCAGGT GGTGGGGCCC TTCGGTTCCT CGTTCCTGAT GCCGAACCAT
CCCAGGTCGC ACATCGTGAT GATCTGCACC GGCACCGGCA GCGCGCCGAT GCGCGCCATG
ACCGAATGGC GCCGGCGCCT GCGCAAGAGC GGCAAGTTCG AAGGCGGCAA GCTCATGCTG
TTCTTCGGCG CGCGCACGCA GCAGGAGCTG CCGTACTTCG GGCCGCTGCA GTCGCTGCCC
AAGGACTTCA TCGACATCAA CCTCGCGTTC TCGCGCACGC CGGGCCAACC CAGGCGCTAC
GTGCAGGACC TGATGCGCGA ACGCGCCGCC GACCTGGCCG CGTTGCTGAA GGACGGTGCG
AGCCACTTCT ACGTATGCGG GCTCAAGAGC ATGGAAGAGG GCGTGGTGCT TGCCTTGCGC
GACGTGGCGA AGGAAGCGGG CCTGGACTGG GACACCGTGG GTGCCGCATT GAAGCGCGAA
GGCCGCCTGC ACCTCGAAAC CTATTAA
 
Protein sequence
MDMAVEAGVI KQHLIDPEIC IRCNTCEATC PVNAITHDDN NYVVRADICN GCMACISPCP 
TGSIDNWRTM PLVRAYTIEE QLSWESLPAE LTPEELEAAG VSASEAGDEA APAAAPASSQ
TAVDAIEPVF NSAQYGATVP PWSAAHAYTN LFAPKSPTTA TVVGNFNCTE AGFDSETHHI
VLDFGVVPFP VLEGQSIGIV PPGVDAIGKR HHARQYSVAS PRNGERPGYN NVSLTVKRVT
EDHQGDPVRG VCSNYVCDLK VGDTVQVVGP FGSSFLMPNH PRSHIVMICT GTGSAPMRAM
TEWRRRLRKS GKFEGGKLML FFGARTQQEL PYFGPLQSLP KDFIDINLAF SRTPGQPRRY
VQDLMRERAA DLAALLKDGA SHFYVCGLKS MEEGVVLALR DVAKEAGLDW DTVGAALKRE
GRLHLETY