| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0088 |
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| Symbol | |
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| ID | 7971623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 86141 |
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| End bp | 86944 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790690 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002942017 |
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| Protein GI | 239813107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCCG ACTTCGCCAC CATCAACTGG CGCGGCCGCC CCGTGCACAT CGAATGCCAA
TGGATCGCCC CCGAGCGCAC CGATGCCCCG CTCATCGTCT TCCTGCACGA AGGCCTCGGC
TCCATCGCGA TGTGGAAGGA CTTCCCCGCG CAAGTCTGCA ACGCCGCCAA CGCCCGCGGC
CTCGTGTTCT CGCGCCCCGG CTACGGCCGC TCGACGCCGC GCGCCGACGA CGAGATCTGG
GACGTCGACT TCATGCACCG CCAGGCACAC GAGGTGCTGC CCGCCCTCTT CACCGCACTG
AAGCTCGACG ATGAAAAGCC CTGGCTCTTC GGCCACAGCG ACGGCGGCTC GATCTCGCTG
CTGTATGCCT CGCGCTTTGC GGACCGCGTC AGCGGCCTGA TCGTGCTCGC GCCGCACATC
TTCGTGGAAG ACGTGACCGT CGCGAACATC GAACAGGCCC GCACCGCGTA CCTCTCGACC
GACCTGCCGG CAAAGCTCGG CCGCTACCAC GACAGCGCCG ACTCGGCCTT CTGGGGCTGG
AACCGCATCT GGCTGCACCC GCCCTTCCGC GAATGGAACA TCGAGGCCGA ACTCGACACC
ATCCGCTGCC CCGTCCTCGC CATCCAGGGC ACGGGCGACG AGTACGGCAC GCTCGCGCAG
ATCCACGGCA TCGCGGCGCG CGTCGGGGGA TGCGAGCTGC TCGAAATCCC GGAATGCGGG
CATTCCCCGC ATCGCGATCA GCCGGATCGT GTCATCGTCG CGGCCACTTC TTTCATTACC
AAAAACAGGA GACAAACACC ATGA
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| Protein sequence | MTPDFATINW RGRPVHIECQ WIAPERTDAP LIVFLHEGLG SIAMWKDFPA QVCNAANARG
LVFSRPGYGR STPRADDEIW DVDFMHRQAH EVLPALFTAL KLDDEKPWLF GHSDGGSISL
LYASRFADRV SGLIVLAPHI FVEDVTVANI EQARTAYLST DLPAKLGRYH DSADSAFWGW
NRIWLHPPFR EWNIEAELDT IRCPVLAIQG TGDEYGTLAQ IHGIAARVGG CELLEIPECG
HSPHRDQPDR VIVAATSFIT KNRRQTP
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