| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0085 |
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| Symbol | |
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| ID | 7971620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 82961 |
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| End bp | 83935 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790687 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002942014 |
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| Protein GI | 239813104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAGG TCCACACTTC TTCCATGCGG CGCGGCGCGT TCCTCGTGCC GGTGGCCTGC
GCCATTGCCA TCGGCGTGCT CGGCCCGCTC ATGGGCAACT ACGTCTCGGA CTTCGTCGTC
AAGGTGATGA TCCTGTCGAT CTTCGCGCTG AGCCTCGAAC TGCTGGTCGG CATGACGGGG
CTCGTGAGCC TGGGCCACGC GGCGTTCTAC GGCATCGGCG CCTACGTCAC GGTGCTGGCC
TCGGGCAGCG AGGGCGGCAA CCTCGCGCTG CTGCTGCCGC TGGCCATGGG CGCGGCGGCG
CTCTACGCAT TGTTCGTGGG CGCGCTGAGC CTGCGCACGC GCGGCGTGTA CTTCATCATG
GTGACGCTGG CCTTCGCGCA GATGGCTTTT TTCGTGTTCC ACGACACCAA GGTGGGCGGC
GGCAGCGACG GCATCTACAT GTACGTGCGG CCGGCCATCG GCAAGCTCGA CATGGAGAAC
CGCATGGTGC TGTTCTACAT CGTGCTCGCA TCGCTGGTGT TCACCTACGG CCTTTTGGCG
CTGGTGCGGC GCTCGCGCTT CGGCGCGGCG CTCGCGGGCA TCCGCGTGAA CGAGCAGCGC
ATGCGCGCGG CGGGCTTTCC GGTGTACGGC TACAAGCTCG CGGCCTTCGT GCTGGCGGGC
GCGCTGGCCG GGCTCGCGGG CTTTCTGCTG GCCTCGCGCG ACGGCGTGGT CAACCCCGAG
CTGATGGCCT GGCACAACTC GGGCGAGGTG CTGCTGATGG TGATCCTCGG CGGCCTCGGC
CATCTGCGCG GCGCTGTCAT CGGCGCCATC GCGTTCACGC TGCTGAAGGA AATCTTCTCG
ACGCACGCCG TGATGGGGCC GCTCGCGGAC CACTGGCAGC TGACGCTGGG CATCGCGATC
ATCGTGTTCG TGGCGTGGCT GCCCAAGGGG CTGATCGGCC TGGCGAAGCG GCTGTCGCCG
AAGGGGGCTG CATGA
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| Protein sequence | MMQVHTSSMR RGAFLVPVAC AIAIGVLGPL MGNYVSDFVV KVMILSIFAL SLELLVGMTG
LVSLGHAAFY GIGAYVTVLA SGSEGGNLAL LLPLAMGAAA LYALFVGALS LRTRGVYFIM
VTLAFAQMAF FVFHDTKVGG GSDGIYMYVR PAIGKLDMEN RMVLFYIVLA SLVFTYGLLA
LVRRSRFGAA LAGIRVNEQR MRAAGFPVYG YKLAAFVLAG ALAGLAGFLL ASRDGVVNPE
LMAWHNSGEV LLMVILGGLG HLRGAVIGAI AFTLLKEIFS THAVMGPLAD HWQLTLGIAI
IVFVAWLPKG LIGLAKRLSP KGAA
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