| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0083 |
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| Symbol | |
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| ID | 7971617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 81372 |
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| End bp | 82073 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790685 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942012 |
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| Protein GI | 239813102 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTCG TCCGCGATCT CAACACCTAC TACGGCAACA GCCACATCCT GCGCGGCGTG
CATGCCGGCA TTCCGGCCGC CACCTCGGTC GGCCTGCTCG GGCGCAACGG CATGGGCAAG
ACCACGCTGA TCCGCACGGT CATGGGCTAT GTGCGACCCG CTTCGGGCGA GGTGCAGGTC
GATGGCCGCA CCGTCACCGG CTGGCCGCCC GAGAAGATGG CGCGCCTGGG CATCGGCTAC
GTGCCCGAAG GCCGCGGCAT CTTTCCGAAT CTCTCGGTGC GCGAGAACCT CGTGATGAGC
GAGCGCGCGG GCATCGACGG CCGGCGCGCC TGGACCTTCG ACCGCGTGAT GGCCACCTTT
CCGCGGCTGG CCGAGCGGCT CTCGCACGGC GGCCAGCAGC TCTCGGGCGG CGAGCAGCAG
ATGCTCTCGA TCGGCCGCGC GCTCATGACC AACCCGCGCC TGCTGATCCT CGACGAGGCC
ACCGAGGGCC TCGCGCCGCT GATCGTGGCC GAGATCTGGC GCGTGATCAG CGAGATCCGC
GCGACCGGCA TCGCCACGCT GATCGTGGAC CGCGACTACC GCAAGGTGCT TGCGCACACC
GATCTGGCGG TGGTGATGGA AAAGGGCCAG ATCGTGCGGC ATGGCGCGTC GGCCGACCTG
CTGTCCGAGC CGAAGGCGCT CGAAGACTTG CTGGGCGTGT AG
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| Protein sequence | MLVVRDLNTY YGNSHILRGV HAGIPAATSV GLLGRNGMGK TTLIRTVMGY VRPASGEVQV
DGRTVTGWPP EKMARLGIGY VPEGRGIFPN LSVRENLVMS ERAGIDGRRA WTFDRVMATF
PRLAERLSHG GQQLSGGEQQ MLSIGRALMT NPRLLILDEA TEGLAPLIVA EIWRVISEIR
ATGIATLIVD RDYRKVLAHT DLAVVMEKGQ IVRHGASADL LSEPKALEDL LGV
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