| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0081 |
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| Symbol | |
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| ID | 7974039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 78447 |
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| End bp | 80357 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790683 |
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| Product | Tannase and feruloyl esterase |
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| Protein accession | YP_002942010 |
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| Protein GI | 239813100 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.369493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGTC CTCAACGCCG CACGCGCACC GCATCGCGCA CCGCCATCGC CGCGCGGCTG
GCCGCCGCCT GCCTGGGCAT CGGCACTCTT GCAACGCTCG CGGCCTGCGG CGGCAGCGGC
TCTTCGGGCG CTTCGCTGCC TTTCCTTCCC GTGGTGCCGC CGCCCTCCAC GCCCGGCACA
TCGAGCGCGC TCGCATGCGA CGAAAGCCTG AAGACCGCCT TCAAGCCCGA CGCAAACACC
ACCGTCACGG TGGTGAAGCA GTTCAAGCAG GGCGATGACC TGAACCTCGA CGGCAAGGCA
TCGGGCACCG TGGCGGCCAG CGACGTGTGC ATGGTCAAGC TCAACGTGGG GCCGGGCCAT
GCGGGACCGG CCGATGCGCC GTCCACCTCG CCCGGCATCG GCATCGAGGT ATGGCTGCCG
GCGGCAGCCA AATGGAACAA CCGCCTGCGC GTGCTGGGCG GCGGCGGCTT TGTGGGCGAT
GCGGGCATCA GCTCCAGGAC GCAGATCGGC GGTGCCGGTG CGGCGGCCAT TGCGGCGGGC
CAAGGATCGG TGAGTGCAGT GACCGATGCG GGGCATGCAT CGAAATTGCC CGTGCCCGCG
GTGGACGGCT CGTTCGCCAT GAACCCCGAC GGCACCGTCA ACACCACGCT CTGGACCGAC
TTCGCGAGCC GCGGCATCCA CGAGATGGCC GTGAAGGCCA AGGCGCTCGC ATCCGGCTTC
TACCAGCGCG ACGCGCAGTA CGCCTATTGG GACGGCTGCT CCACCGGCGG CCGCCAGGGC
CACATGCAGG CGCAGGTGAA CCCCGGCGAC TTCGACGGCA TCCTGGCGGG CAACAGCGCC
ATCAACTGGA CCACCTTCAT CACCTCCGAG CTCTATCCGC AGATCGTGAT GCAGCGCGAC
CTGGGCGGCA CGCCGCTCGC GGCCGAGCAG CTCGCGCTGG TGTCGTCCGC CGCGGTGAGC
GCTTGCGACA GTACGCTCAC CGGCCAGCAC GAAGGCTTCA TCAGCGACCC GGCCGCCTGC
AAGTACGACC CCGTGCAGGA CAAGGCGGTG CTGTGCATCG GCAGCGGCGG CACCAACGCC
ACCGCGGCCT GCCTGAGCAC CGTGCAGGCA CAGGCCGTCA ACAAGATCTG GTACGGCCAG
ACGCGCGACG GCAGCGCGCC CGCTCCCGCG AGCGACATCG GCTACGGCGC CACGCTGGCG
CCGGGCCAGC TCTGGTACGG CCTCACGCGC GGCACCTCGC TCAACAGCCC CGGCGCGCCG
GGATTCTCGC TGGCGGACTC CACGGCGGGC ACGCCCCATC CGTTTCCGAT CGCGGCGCAC
CAGGTGGCCC TGAACCTGCA GGACCCGACG ATCGCAACGC CCGACTTCGT GAACGCAACC
GGCAACGGCG CGAACAACTG GAAGGGCCTG TCGTACGCCC AACTGGCCAA TGCCAGCGAT
CGCGGCAAGG CGCTGCAATC CGCGTTCGCG GGCATCAACG CCGACAACCC CGACCTCGCC
AGGTTCCGCG ACCGCGGCGC CAAGCTGCTG ACCTATCACG GCCTGGCCGA CCAGCTGATC
GCCAGCTCCG GCACGGCGAA CTACTACGAG CGCGTGGCCA AGACGATGGG CGGCATCGAG
GCCACGCAGA AGTTCTACCG CTATCTCGAA ATCCCGGCGA TGGGCCACTG CGTAGGCGTC
GGCTCGGTCA ACGGGCTCGC CGGCGTGAGC CCCGCGGCCA ACCCGCCGCT GCCGGCGCCC
GACCAGCTGT TCTCGGCCCT CACGGACTGG GTCGAGAAAG GCATTGCACC CGACAACCTG
GTGCTGCAGA ACGCCGACAA GTCGCTTGCG CGGCCGCTTT GCACCTATCC GAAAAAGGTC
GCCTACACGG GCGGCGATGT GAAGGCGGCG GCGAGCTTCG CCTGCCGCTG A
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| Protein sequence | MPRPQRRTRT ASRTAIAARL AAACLGIGTL ATLAACGGSG SSGASLPFLP VVPPPSTPGT
SSALACDESL KTAFKPDANT TVTVVKQFKQ GDDLNLDGKA SGTVAASDVC MVKLNVGPGH
AGPADAPSTS PGIGIEVWLP AAAKWNNRLR VLGGGGFVGD AGISSRTQIG GAGAAAIAAG
QGSVSAVTDA GHASKLPVPA VDGSFAMNPD GTVNTTLWTD FASRGIHEMA VKAKALASGF
YQRDAQYAYW DGCSTGGRQG HMQAQVNPGD FDGILAGNSA INWTTFITSE LYPQIVMQRD
LGGTPLAAEQ LALVSSAAVS ACDSTLTGQH EGFISDPAAC KYDPVQDKAV LCIGSGGTNA
TAACLSTVQA QAVNKIWYGQ TRDGSAPAPA SDIGYGATLA PGQLWYGLTR GTSLNSPGAP
GFSLADSTAG TPHPFPIAAH QVALNLQDPT IATPDFVNAT GNGANNWKGL SYAQLANASD
RGKALQSAFA GINADNPDLA RFRDRGAKLL TYHGLADQLI ASSGTANYYE RVAKTMGGIE
ATQKFYRYLE IPAMGHCVGV GSVNGLAGVS PAANPPLPAP DQLFSALTDW VEKGIAPDNL
VLQNADKSLA RPLCTYPKKV AYTGGDVKAA ASFACR
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