Gene Vapar_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0076 
Symbol 
ID7974034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp72342 
End bp74144 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content68% 
IMG OID644790678 
Productputative potassium transport flavoprotein 
Protein accessionYP_002942005 
Protein GI239813095 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.6979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACC CGACCACCGG TCCCAACCGG GCCGCCGCCA CCTGGCTCGC CGACTTTGCC 
GCCGCCCTCG CGCGCGGCGA CGCCGATGCG GCCGTCTCGC TGTTCGAGGC CGACAGCTAC
TGGCGCGACC TCGTCGCCTT CACCTGGAAC ATCCGCACGC AGGAAGGCGC CGATGCCATC
CGCGCGATGC TGCAGGCGCG GCTGGCCGAC ACGCAGCCCG CGGCCTTTGC GCTGGAGGGC
GAGGCGACCG AGGCCGACGG CGTGGTCGAT GCCTGGTTCA CTTTCGAGAC GCGCGTGGCG
CGCGGCCGCG GCCACCTTCG GCTGCGTGGC GGCAAGGCCT GGACGCTGCT CACCACCATG
ACCGAGCTCA AGGGCTTCGA GGAAAAGACG GGCGAGAACC GCATCAAGGG CGCGGAGCAC
GGCGTGCACA AGGGCCGCAA GAACTGGCTC GAGAAGCGCC GCGACGAAGA GGCCGCGCTC
GGCTACACCG AGCAGCCCGA GGTAGTGATC ATCGGCGGCG GCCAGGGCGG CATCGCGCTG
GGCGCGCGGC TGCGCCGGCT GGGCGTGCCG ACCATCATCG TGGAGCGCAA CGCGAAGGCC
GGCGACTCCT GGCGCAAGCG CTACAAGTCG CTGTGCCTGC ACGACCCGGT CTGGTACGAC
CACCTGCCCT ACATGCCCTT TCCCGACGAC TGGCCGGTGT TCGCGCCCAA GGACAAGATC
GGCGATTGGC TCGAGATGTA CACCAAGATC ATGGAGCTCA ACTACTGGAG CTCCACCCAC
GCGAGGAAGG CCCGCTTCGA CGAGGCCGCG CAGCGCTGGG AAGTGACGGT CGAGCGCGAA
GGCAAGCCGG TGGTGCTGCG GCCGAGGCAG CTTGTGTTCG CGCTCGGCGT CTCGGGCTAC
CCGAACGTGC CGAAGATCGC GGGCGCAGAG AACTTCAAGG GCGACCAGCA CCATTCGAGC
CAGCACCCCG GGCCCGAGGC CTATGCCGGC AAGAAGTGCG TGGTGCTGGG CTCGAACAAC
TCGGCGCACG ACATCTGCGC GGCGCTGTGG GAGCACGGCG CCGACGTGAC GATGGTCCAG
CGCTCGTCCA CGCACATCGC GCCGTCGCAG TCGCTGATGG AGCTGGCACT GGGCGGGCTC
TACTCCGAGC AGGCCGTGAA GAACGGCATC GACCACCACA AGGGCGACCT GATCTTCGCC
TCGGTGCCCT ACAGGATCAT GCACACCTTC CACATCCCGG TGTACGAGGA GATGAAGAAG
CGCGATGCCG ACCTGTACGC GCGGCTCGAG AAGGCGGGCT TCCTGCTGGA CTTCGGTGTC
GACGGCTCGG GACTCTTCAT GAAGTACCTG CGGCGCGGCT CGGGCTACTA CATCGACGTG
GGCGCCTCCG AGCTGGTGGC CAACGGCAGC ATCCACCTGA AAAGCGGCGT GAACATCGAG
CGGGTGAACG AGCGCTCGGT CACGCTGACC GACGGCACCG AGCTGCCGGC TGACCTGCTG
GTGTACGCCA CCGGCTACGG CTCCATGAAC GGCTGGCTGG CCGACCTGAT CTCGCCCGAG
ATCGCCGACA AGGTCGGCAA GTGCTGGGGC CTGGGCTCCG GCACGCCGAA GGACCCGGGC
CCGTGGGAGG GCGAGCTGCG CAACATGTGG AAGCCCACGC AGGTCGAGCA CCTCTGGTTC
CACGGCGGCA ACCTGCACCA GTCGCGCCAC TACTCGCAGT TCCTGGCGCT GCAGCTGAAG
GCGCGCATGG AAGGCATCGA CACGCCGGTG TACGAGCGCG CGCCGTCGTA TCACACGCGC
TGA
 
Protein sequence
MTDPTTGPNR AAATWLADFA AALARGDADA AVSLFEADSY WRDLVAFTWN IRTQEGADAI 
RAMLQARLAD TQPAAFALEG EATEADGVVD AWFTFETRVA RGRGHLRLRG GKAWTLLTTM
TELKGFEEKT GENRIKGAEH GVHKGRKNWL EKRRDEEAAL GYTEQPEVVI IGGGQGGIAL
GARLRRLGVP TIIVERNAKA GDSWRKRYKS LCLHDPVWYD HLPYMPFPDD WPVFAPKDKI
GDWLEMYTKI MELNYWSSTH ARKARFDEAA QRWEVTVERE GKPVVLRPRQ LVFALGVSGY
PNVPKIAGAE NFKGDQHHSS QHPGPEAYAG KKCVVLGSNN SAHDICAALW EHGADVTMVQ
RSSTHIAPSQ SLMELALGGL YSEQAVKNGI DHHKGDLIFA SVPYRIMHTF HIPVYEEMKK
RDADLYARLE KAGFLLDFGV DGSGLFMKYL RRGSGYYIDV GASELVANGS IHLKSGVNIE
RVNERSVTLT DGTELPADLL VYATGYGSMN GWLADLISPE IADKVGKCWG LGSGTPKDPG
PWEGELRNMW KPTQVEHLWF HGGNLHQSRH YSQFLALQLK ARMEGIDTPV YERAPSYHTR