| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0073 |
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| Symbol | |
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| ID | 7974031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 69514 |
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| End bp | 70506 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790675 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942002 |
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| Protein GI | 239813092 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.614615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCC GCCGCCACTT CCTCCACACG CTCGGCGCAG CCACTGCGCT GGGCGCCCTC
TCGCCGCTGG CCGCGCTGGC CCAGGCGCTC GAGCAGGTCA AGATCTACTA CGGCTTCCCG
GCCGGCAGTG CCGGCGACAG CGTGGCGCGC CGCGTGGGCG AAAAGCTCGC GGGCTCGGCC
TACTGCCGCA ACGCGGCCGT GGTCGAGAAC AAGCCGGGCG CCGGCGGGCG CATCGCGCTG
GAAACCCTCA GGAGCGCGTC GGCCGACGGC AGCGTGCTGG CGCTGTCGCC CTTCTCGTGC
ACCTCGATCT ATCCGCACAT CTACAGCAAG CTCAGCTACG ACCCGGCCAA GGATTTCGCG
CCGGTGTCGA TCGCCGCCGT CATGCACCAC GGCCTCGCGG TCGGCCCGCT GGTGCCGCCC
GAGGTGCGCA CGGTGAAGGA CTTCCTCGCC TGGGCCAAGG CCAACCCGAA CCAGGCCAGC
TACGGCTCGC CGGCGGCCGG CTCGACGCCG CACTTCATCG GCGCGCTGCT CGGCCTCAAC
CACGGGGTCG ATCTCAAGCA CGTGCCCTAC CGCGGCTCCA TTCCGGGCGT GACCGACGTG
GTGGGCGGAC AGATCGCCGC CATGGTCACG CCCAGCGGCG ACTTCATTCC CAACCACAAG
GCCGGCAAGC TGCGGCTGCT CGCCACCTCG GGCAAGGCCC GCTCGCCCTT CTCGCCCGAG
GTGCCGACCT TTGCCGAGCA GGGCTTCGCC GAGCTGACCA CCGAGGAATG GTTCGGCTTC
TACGCGCCGG CCCGGACGCC GGCCAGCGTG GTGGCAACGG CCAATGCGGC GATCAACGCG
GCCATCAAGG AAAAGGTGGT GACCGACAGC CTGGCCGTGG TCGGCCTGAT CGCCCAGGGC
TCCACCGCCG AGGAGATGGC GCGCTCGCAG CGCGCCGAGG CCGAGCGCTG GGGCCCGCTG
GTCAGGAAGA TCGGCTTCAC GGCCGACTCC TGA
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| Protein sequence | MDTRRHFLHT LGAATALGAL SPLAALAQAL EQVKIYYGFP AGSAGDSVAR RVGEKLAGSA
YCRNAAVVEN KPGAGGRIAL ETLRSASADG SVLALSPFSC TSIYPHIYSK LSYDPAKDFA
PVSIAAVMHH GLAVGPLVPP EVRTVKDFLA WAKANPNQAS YGSPAAGSTP HFIGALLGLN
HGVDLKHVPY RGSIPGVTDV VGGQIAAMVT PSGDFIPNHK AGKLRLLATS GKARSPFSPE
VPTFAEQGFA ELTTEEWFGF YAPARTPASV VATANAAINA AIKEKVVTDS LAVVGLIAQG
STAEEMARSQ RAEAERWGPL VRKIGFTADS
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