| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0055 |
|---|
| Symbol | |
|---|
| ID | 7974013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 55459 |
|---|
| End bp | 55827 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644790657 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002941984 |
|---|
| Protein GI | 239813074 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAA AGAAAACACC CGCCCATGGA TTCGCGCTGG CCGCGGCAAG CGCCGCGCTC
CTGCTGCTGT CCGCCGCCAC CGTTCACGCG CAGAGCGCCG ACAACCCGCC CAGGGCGCAG
CCGGCGCACA CGCTCAAGCC GCCGCCGCGT GACAGCAAGG TCGTGAACAG CGTGCAGCGC
GGCACCAACG CCGCCGGCCG CGGCATCGAC CGCGCCGAGA ACGCGACGCG GCGCGGCGTC
AACAACGTTT CGGAAAAAGC CAGCCGGCCG GTGCGCCGGG TCGGCGAAGC CTTCGGACGC
AAGCTCGCGC CGGGTTCGAG CGGGCGCACT GCGCCGCCGC CTGTGGGGCC GCAGGGTAGC
GCGCCTTGA
|
|---|
| Protein sequence | MTIKKTPAHG FALAAASAAL LLLSAATVHA QSADNPPRAQ PAHTLKPPPR DSKVVNSVQR
GTNAAGRGID RAENATRRGV NNVSEKASRP VRRVGEAFGR KLAPGSSGRT APPPVGPQGS
AP
|
|---|
| |