| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0051 |
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| Symbol | |
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| ID | 7974009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 51838 |
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| End bp | 52737 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790653 |
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| Product | peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_002941980 |
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| Protein GI | 239813070 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCA GGACAAGGTT TCCGTTCGCG GCCGTGGCCG TCGGCGCACT GCTGCTGACC
GGTTGCGCGA CCACCGACAT GCAGATGGGC AGCCAGTCGG CCAAGACCAT GGCCACGGGC
AGCGCCGCGG GTTCCGCCAC CGCCGGCGAA AGCAGCCAGC TCGAGCGCTG CGAATCGCCG
CTGGGCACCG TCTCGCTGAT CGAGAACGTG AATGCCGGCT GGTACACCAT CCTCACCGGC
GAGTACCGCC TGCCGCCCAC GGCCAACCTG CTGCGCCTCT TGGTGCAGCA GTCGAACTGC
TTCGTGGTGG TGGAGCGCGG CGCGGCCGGC ATGAACGCGA TGACGCGCGA GCGCGCGCTC
ATGCAGTCGG GCGAAATGCG CGGCGGCAGC AACTTCGGCC GCGGCCAGAT GGTGGCGTCC
GACTACGGCC TGTCGCCCGA GATCGTGTTC AGCAACAGCG ATGCCGGCGG CATCGGCGGC
GCGCTGGGCG GGCTGGTCGG CGGCGGCCGG GGCCGCGCGC TGGCCACCAT CGGCGGCAAC
ATGCAGACCA AGGAAGCCAG CGCGCTGCTG ACGCTCATCG ACAACCGCTC GGGCGTGCAG
GTCGCGGCTT CGGAAGGCAG CGCCTCCAAG ACCGATTTCG GCGCCTTCGG TGCACTGGCC
GGCCGCAGTG CCGGCGGCGG CCTCGGCGGC TACACCAACA CGGCGCAAGG CAAGGTGATT
GCCGCGGCCT TCATGGACGC GTTCAACCAG ATGGTCCGTT CGCTGCGCAG CTACAAGGCG
CAGACGGTGC GCGGCCAGGG CCTGGGCGGC GGCGGCCGGC TCGGCGTGGA TGGCGGCGCG
GCACCGTCGC AGACCTACGT GCCGGCCGAG CAGCCGGCGC CCGCACGCCG CCGCAGGTAA
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| Protein sequence | MKFRTRFPFA AVAVGALLLT GCATTDMQMG SQSAKTMATG SAAGSATAGE SSQLERCESP
LGTVSLIENV NAGWYTILTG EYRLPPTANL LRLLVQQSNC FVVVERGAAG MNAMTRERAL
MQSGEMRGGS NFGRGQMVAS DYGLSPEIVF SNSDAGGIGG ALGGLVGGGR GRALATIGGN
MQTKEASALL TLIDNRSGVQ VAASEGSASK TDFGAFGALA GRSAGGGLGG YTNTAQGKVI
AAAFMDAFNQ MVRSLRSYKA QTVRGQGLGG GGRLGVDGGA APSQTYVPAE QPAPARRRR
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