| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0049 |
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| Symbol | |
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| ID | 7974007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 50231 |
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| End bp | 50782 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790651 |
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| Product | protein of unknown function DUF1234 |
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| Protein accession | YP_002941978 |
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| Protein GI | 239813068 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTGT TGTCTCGCGT CTTCCTGCTG CCGGGTTGGC AGAACAGCGG CCCCGGCCAT
TGGCAGACCC GCTGGGAATC GGTCCACGGC GACCACCGCG TCGAGCAGCA CGACTGGATG
CGGCCGCTGC GCGGCGACTG GTCCGCGCGG CTCGAGGAAG AGGTGCTGGC GGCACCCGAG
CCCGTGGTCT TTGCGGCGCA CAGCCTGGGA TGCATCCTCG TTGCAGCCTG GGCTGCGCAT
TCGCGCAATA CGCACAAGGT GCGGGGCGCG CTGCTGGTGG CACCCGGCGA CGTCGAACGC
GACGACCTGC GCCAGCTGAT TCCGGGCTGG GCGCCGATCG TGCGCCAGCC GCTGCCCTTT
GCCTCGGTGC TGATCGCCGC CAACGACGAC CCCTACTGCG AGGCCGCGCG CTCGCGCCAG
ATGGCTGCCG ACTGGGGCGC GCGCTTCGTC GACGCCGGTG CGGGTGGCCA CCTGAACGCC
GAATCCGGCC TGGGCGACTG GTCCCAGGGC CGGCAACTAC TGAACGAAAT CTCGACGAAA
GACACGCACT GA
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| Protein sequence | MGVLSRVFLL PGWQNSGPGH WQTRWESVHG DHRVEQHDWM RPLRGDWSAR LEEEVLAAPE
PVVFAAHSLG CILVAAWAAH SRNTHKVRGA LLVAPGDVER DDLRQLIPGW APIVRQPLPF
ASVLIAANDD PYCEAARSRQ MAADWGARFV DAGAGGHLNA ESGLGDWSQG RQLLNEISTK
DTH
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