Gene Vapar_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0048 
Symbol 
ID7974006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp49317 
End bp50231 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content67% 
IMG OID644790650 
ProductCobyrinic acid ac-diamide synthase 
Protein accessionYP_002941977 
Protein GI239813067 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGA TTTTCTGCAT TGCCAACCAA AAGGGCGGCG TCGGCAAGAC CACAACCACC 
GTCAACCTGG CCGCCGGCCT GGCCAAGGTG GGCCAGCGGG TGCTGATGAT CGACCTCGAT
CCCCAAGGCA ATGCAACCAT GGGTTCGGGC ATCGACAAGC GCCAGCTGGA GCTCACGGTG
TACGACGTGC TGCTCGAGTC GGCTTCGGTG GCCGAGGCGC GCGTCAAGGC CGACAAGCTG
GTGGAGGGCG GCTGTGGCTA CGACGTGCTC GGTGCCAACC GCGAGCTGGC CGGCGCCGAA
GTCGAAATGG TGGCGCTCGA CCGCCGCGAA AAGCGCTTGC GCACCGCACT TGCGACGGTG
GGCGCCGAGT ACGACTTTGT GCTGATCGAC TGCCCGCCGA GCCTGAGCCT GCTGACGCTC
AACGGCCTGT GCGCCGCCCA CGGCGTGATC GTGCCGATGC AGTGCGAGTA CTTCGCGCTC
GAGGGGCTCA CGGACCTGGT CAACACCATC AAGCAGGTGC ATGCCAACCT CAACAAGAAC
CTGCAGATCA TCGGCCTGCT GCGCGTGATG TTCGATCCGC GCATCACGCT GCAGCAGCAG
GTGAGCGAGC AGCTCAAGGC CCACTTCGGC GACAAGGTGT TCGACACCGT GATCCCGCGC
AATGTGCGGC TGGCCGAAGC GCCCAGCTAT GGCCTGCCGG GCGTGGTGTT CGATCCGGCC
GCGCGCGGCA GCCAGGCCTT CGTTGCCTTT GCCAAGGAGC TGGTCGAGAA GATGCCGCCC
GCCAGCGCCT TCGCATCCGG TGCCGTTGCG CCGCCCATTG CGCCGGTCGG GCCGGTCGCG
CCGCCCAACC TGGCGGTCCC GGAGGATGTG CTGTCGCCGG CAGGCGGCCC CGATTCGGGC
GAGAAAAGCT TCTGA
 
Protein sequence
MAKIFCIANQ KGGVGKTTTT VNLAAGLAKV GQRVLMIDLD PQGNATMGSG IDKRQLELTV 
YDVLLESASV AEARVKADKL VEGGCGYDVL GANRELAGAE VEMVALDRRE KRLRTALATV
GAEYDFVLID CPPSLSLLTL NGLCAAHGVI VPMQCEYFAL EGLTDLVNTI KQVHANLNKN
LQIIGLLRVM FDPRITLQQQ VSEQLKAHFG DKVFDTVIPR NVRLAEAPSY GLPGVVFDPA
ARGSQAFVAF AKELVEKMPP ASAFASGAVA PPIAPVGPVA PPNLAVPEDV LSPAGGPDSG
EKSF