Gene Vapar_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0034 
Symbol 
ID7973992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp36747 
End bp37049 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content65% 
IMG OID644790636 
Productphosphopantetheine-binding 
Protein accessionYP_002941963 
Protein GI239813053 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTT CCTCCTCCTC CTCCTCGTCT TCGACCGTCT TCAACAGCAT CGCCGCGATC 
CTGGTGAACC AGTTCGACGT GGCGCGCGAT GCCATCGCGC CCGGCGCGGC CTTGTCCGAG
CTCGGCCTGG ATTCGCTCTC GCTGATGGAA TTCGTGTTCG CGGTGGAAGA CGCCTTCCAT
CTGCGCCTGC CCGAAGACCG CCTCGATCCG CGCGAGGCCG GCATCACGCT CGGCCACCTG
TGCGAGGCGA TCGAAGCCCA GATCGACTGC AAGCTCGATT CGCCGATGGC CGCGCAGGCG
TGA
 
Protein sequence
MSSSSSSSSS STVFNSIAAI LVNQFDVARD AIAPGAALSE LGLDSLSLME FVFAVEDAFH 
LRLPEDRLDP REAGITLGHL CEAIEAQIDC KLDSPMAAQA