| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0033 |
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| Symbol | |
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| ID | 7973991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 35524 |
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| End bp | 36750 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644790635 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_002941962 |
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| Protein GI | 239813052 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCG CCCGCGTTCA CGTCACCGGC ATCGGCTTGG TCACACCGCT GGGCGGCACC
GTCGAATCCT TCGACGATGC GCTCTTCAGC GGCCGTTCCG CGGTGCGCGC GCGAGCGCTC
GAGATCGCGG GCCTCGATCC GATCACGCTG GCCGTGGCCG CCTGCGATTT CGACGCGGCC
GCCGTGCCCA GCAATTCGCG CCTGCCGCTC GATCGAGGCA CCGCCATGGC ACTCGCGGCC
GCGCGCGATG CCGCAGCGCA GGCGCGCCTG GCTGCCGGCA GCGTCGACCC CGAACGCCTG
GGCATCTACT GGGGCAGCGG GCTGGCGGGC GCCGGCAGCT TCGACGACAC CACGCGCGCG
CTCTACGGTG AGCAGCGCCG CATGCGGCCG ACCACCGTGC TCACCGTGAT GCCCAACGCG
GCGGTGGCGG AGCTCGCATT GCAGTTCGGC GCACAGGGCG CGGCCATTGC ATACGCCTGC
GCCTGCGCCT CCTCGGCCGT GGCCATCGGC GAGGCGATGC GCGCCATCCG GGGCGGCTGG
ATCGATGTGG CCATCGTCGG GGGACACGAG GCCATGCTCA CGCCGGGCGT GATGGCCAGC
TGGCATGCGA TGCGCGTCAC GGCGCCGCCG CCGCCCGGTG CACCCGCCAG CGCCTGTCGG
CCGTTCTCGA GCGACCGCGC GGGCTTCGCA CTCGGCGAAG GCGCGGCGGC GCTGGTGCTC
GAATCGGAAG CGCATGCCAG CGCGCGAGGC GCCGTCCACG CCTCTTCGCT CTTCCTGGCG
GGCTATGCCA CCAATTGCGA CGCCACGCAC ATCACCAACC CCGACTCCGC CGGCCAGGTG
CGTGCCATGC GCGCGGCGCT GCGCGATGCG GGGATCGAGG CCGCGCAGGT CGGCCACATC
AATGCGCACG GCACGGCGAC CATTGCCGGC GACGCCGCCG AGGCTGCCTC GATCCGCGAA
GTGTTCGGCA ACGCCACGCC CGTGAGCGCC ACCAAGGCCA TCCACGGCCA TGCGCTGGGC
GGCGGCGGTG CCATCGAGCT GGTGGCGGCG CTGCGAACGC TGGCGCAAGG GGTGCTTCCG
CCGACCGCCA ACCTGCGCGT GCCCGATGCG GCCTTCGATC TGGACTTCGT GCGCGGCGAG
CCGCGCGAAG CCCGCCACCT GCGCTACGTG CTTTCCAATT CGTTCGCGTT CGGAGGCACC
AACGCCGTGC TGGTTGCGGG CCGTTGA
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| Protein sequence | MSGARVHVTG IGLVTPLGGT VESFDDALFS GRSAVRARAL EIAGLDPITL AVAACDFDAA
AVPSNSRLPL DRGTAMALAA ARDAAAQARL AAGSVDPERL GIYWGSGLAG AGSFDDTTRA
LYGEQRRMRP TTVLTVMPNA AVAELALQFG AQGAAIAYAC ACASSAVAIG EAMRAIRGGW
IDVAIVGGHE AMLTPGVMAS WHAMRVTAPP PPGAPASACR PFSSDRAGFA LGEGAAALVL
ESEAHASARG AVHASSLFLA GYATNCDATH ITNPDSAGQV RAMRAALRDA GIEAAQVGHI
NAHGTATIAG DAAEAASIRE VFGNATPVSA TKAIHGHALG GGGAIELVAA LRTLAQGVLP
PTANLRVPDA AFDLDFVRGE PREARHLRYV LSNSFAFGGT NAVLVAGR
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