Gene Vapar_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0032 
Symbol 
ID7973990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp34974 
End bp35456 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID644790634 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002941961 
Protein GI239813051 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGGC TCGCCACACC CCAGGACCTC GAAGCGGTCT TCACCATCTA CATGCACGAG 
AGCGTGGTGC CGTTCCTCGG CTACGACCCG ATGCCGCTCG ATGAATTCCG CGCCATCTAC
AAGGAGCTGG TCGACAGCCG CAGCTTCTAC CTCTATGAAG CCGAGGGCCG CGTCGCGGGC
TTCTACCGTG CGACGCGCTA CCCGGGCCGC GCGCGGCACG TGGCCTGCTT CGGCACGCTG
GCGGTCGATC CGTCGCTGCA CGGCAAGGGC ATTGCGCAGG CGATGGTGAA CGATGCCATT
GCCAGGCTCA AGGCCGAGGG CGTCAAGCGC ATCGAGCTCT ATGCCGAGAG CGACAACGCG
CCGGGCCTGC GCTTCTACGA GAAGCTGGGC TTCGAGTACG AAGGCACCCT GCGCAGGTTC
TACAAGCGCG CCGGCGAGGC CGACTACATC GACGATCACC TGCTGGCGCT GCTGATCGAT
TGA
 
Protein sequence
MRRLATPQDL EAVFTIYMHE SVVPFLGYDP MPLDEFRAIY KELVDSRSFY LYEAEGRVAG 
FYRATRYPGR ARHVACFGTL AVDPSLHGKG IAQAMVNDAI ARLKAEGVKR IELYAESDNA
PGLRFYEKLG FEYEGTLRRF YKRAGEADYI DDHLLALLID