Gene Vapar_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0025 
Symbol 
ID7973983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp27609 
End bp28214 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID644790627 
Producthypothetical protein 
Protein accessionYP_002941954 
Protein GI239813044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCC TCACCCTGGC GACATTGATC GTCGTCGGCG CCTACATCCT CAAGTCCAGG 
GACCAGCGCC AGCGCATCGC GCTGCTGGGC AGCCACCTGG GCCGATACCA GATCGAAAGG 
CTGATGGAGA GCCTCACCGA AGGCTACCTG CGCTGCCTGG GCGAGGACAA CGCCGAGCGG 
CGCCAGCAGA TCTGGAGCCT GCTCGATTCC ACCGAGGAAA AGCTCTCGGC CCAGTTCGAC 
AGCTTTGCCG CCGAGTTCGC GCGGGTCGAC GCGGCGGATG CGCGCGTGAG CAAGCTGCCA 
GTGGCCATTC CGTTCGCGCA CAGGCTGTTT CCGGCCGCCA CCTTCGACCT GCGCCAGGCG 
CTGGCGATCC ACGCGCGCGG CATTGCCGAG GTCATGCGCA ACGACGCGGG CCGCACGCCC 
AAGGCCAAGG CCTTCACCAT GTCGGCCGAG CTGTTCCTGA TGCAGCACAC CTGCCACTGG 
TTCTGCAAGT CGAAGACGGT GGCCTCGGCG CGCATGCTGG CGCGGCACAA GACCTCGTAC 
GAGCAACTGC TCGAGGCCGT GAGCCCCGCA ACGCGCCGGG CCTACGCGGC GCTCACGGGC 
CAGTGA
 
Protein sequence
MEILTLATLI VVGAYILKSR DQRQRIALLG SHLGRYQIER LMESLTEGYL RCLGEDNAER 
RQQIWSLLDS TEEKLSAQFD SFAAEFARVD AADARVSKLP VAIPFAHRLF PAATFDLRQA 
LAIHARGIAE VMRNDAGRTP KAKAFTMSAE LFLMQHTCHW FCKSKTVASA RMLARHKTSY 
EQLLEAVSPA TRRAYAALTG Q