Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0012 |
Symbol | |
ID | 7973970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 12105 |
End bp | 13373 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644790614 |
Product | cardiolipin synthase 2 |
Protein accession | YP_002941941 |
Protein GI | 239813031 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAACG TCGGCCAATG GGTGGGCGGC AACCGCATCG CGCTGCTCGA GAACGGCGAG GAGTTCTTCC CGCGCGTGTT CGATGCCATT CGCGGGGCGC AGCGCGAAGT CATCATCGAG ACCTTCATCC TGTTCGAGGA CAAGGTCGGC TTGGCGCTGC ATGCCGCCAT GCGCTCGGCG GCCCAGCGCG GCGTGAAGAT CGATCTGCTG GTCGACGGCT TCGGCTCGCC GGATCTCTCG CGCGAATTCA TCTCGCAGCT GAGCGCCGTG GGCGTGCGGG TGCGGGTGTT CGATCCGGGG CAACCCGTCC TCGGCAAGCG GCTCAACGTG TTTCGGCGGA TGCACCGCAA GATCGTGGTG GTCGATGGAG AACTCGCGTT CGTGGGCGGC ATCAACTATT CGGCCGACCA CCTGCTGGAC TACGGGCCCA AGGCCAAGCA GGACTACGCG GTGGAGCTGC GCGGACCCGT CGTGGCGCAG ATCCACCAGT TCGTGCTGCG CGCCATCGCG CTCGGCGACA AGGGGCCGCG CTGGTTCCGC CGCCGGCTCA AGCAGGCGCC GCCCGTCGAC CGCGAGTCCG TCGGCGATGT GGAGGCGGTG CTCATCACGC GCGACAACCG CCGCCACACC AGCGACATCG AACGCGAGTA CCTGGCCGCG ATCCGCGCCG CGCGCAAGCG CATCGTGATT GCCAACGCGT ATTTCTTTCC CGGCTACAGG CTCATCAAGG AGCTGCGCCG CGCTGCCCGG CGCGGCGTGG ACGTGCGGCT CATCCTGCAA GGCGAGCCCG ACATGCCGAT CGTCAAGACG GCCGCCACCA TGCTCTACCA CCACCTGCTG CATGCGGGCG TGCGCATCTA CGAATACTGC GACCGCCCGC TGCACGCCAA GGTCGCGCTG ATGGACGACG GATGGACCAC GGTCGGCTCG AGCAATCTCG ATCCGCTGAG CCTGTCGCTC AACCTGGAGG CCAACGTGTT TGCGCGTGGC AGGGCCTTCA ACCAGCTGCT GTGGGAACGC ATGGACAAGC TCATGCGCGA GAGCTGCCAG CAGATCGGCG AGGCCGACCT GGAGAGCGGA TGGAGCGGCT GGCGGCTGGT GCGCAGCTTC TTCATCTTCC ACTTCCTGCG CTGGTATCCG TCGTGGCTCG GCTGGCTGCC GCGGCAGGTG CCGCGCCTCA CCCCGGCCGA AGCCATCGAG CTTGCCGAGA AGCGCGAAAA GCGCGAAGGC GCCGGCGACA ACGGGGCCAC GCCGACGGAA GCGGCATGA
|
Protein sequence | MDNVGQWVGG NRIALLENGE EFFPRVFDAI RGAQREVIIE TFILFEDKVG LALHAAMRSA AQRGVKIDLL VDGFGSPDLS REFISQLSAV GVRVRVFDPG QPVLGKRLNV FRRMHRKIVV VDGELAFVGG INYSADHLLD YGPKAKQDYA VELRGPVVAQ IHQFVLRAIA LGDKGPRWFR RRLKQAPPVD RESVGDVEAV LITRDNRRHT SDIEREYLAA IRAARKRIVI ANAYFFPGYR LIKELRRAAR RGVDVRLILQ GEPDMPIVKT AATMLYHHLL HAGVRIYEYC DRPLHAKVAL MDDGWTTVGS SNLDPLSLSL NLEANVFARG RAFNQLLWER MDKLMRESCQ QIGEADLESG WSGWRLVRSF FIFHFLRWYP SWLGWLPRQV PRLTPAEAIE LAEKREKREG AGDNGATPTE AA
|
| |