Gene Bcav_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4196 
Symbol 
ID7858124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4625796 
End bp4626674 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID643868296 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002884196 
Protein GI229822670 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACGCCGCGCG CTACGCCCCG CGCCCGAGCC TCGTGAAGCG ACAGCGGCGG 
GAGCGAGCCT CCTGGATCGG CCGCGGTGTC GTGATGTCAC TGCTCGCCAT CGTCTTCCTG
ATCCCGTTCC TGTGGATGGT GTCGTCGTCC CTCAAGCAGA ACCTCGACAT CTTCGAGATC
CCCATCCGCT GGATCCCCAA CCCCGTCGAC TGGAGCAACT ACGTCGACGT CTGGACCGGC
GAGCGGTCCA TGGTGCGGTA CTTCAGCAAC TCCACGATCG TCGTCGTCGC CACGATCATC
GGCGAGCTGG CCGTCGTGAC GCTCGCGGGA TACGCGTTCG GGCAGCTGCG GTTCAAGGGA
CAGAACGTCC TGTTCATCGC GTTCCTGGCG ACGTCGATGG TGCCGGCCCA GCTGATGCTG
GTCCCGCGCT TCATGTTCTT CCGCGAGCTC GGCCTCTACG ACACGCTGTG GGCGCTGATC
CTGCCGGGGC TAGCGTCGGT GTTCGCGACG TTCCTGCTGC GCCAGCACTT CGCCTCGGCA
CCGCGCGAGC TGGGCGAGGC CGCCCGGATC GACGGCGCCG GTGAGGGCCG GATCTTCTGG
TCCATCTACC TCCCGATGGC GCGACCGGCG CTGGCGGCGC TGGCGATCCT GATCTTCGAC
TCGACGTGGA ACGACTACGA GAGCGCGCTC ATCATGATCA CGGACGAGGC GAAGTACACG
GTGCCCCTGG GGCTGACGCG GTTCATGTCC GAGGACGGCA CGGTGTCGAT GGGCCCGGCC
ATGGCCGGCT CGGTCTCGTC CCTCATCCCT GTGCTCGTCA TCTTCCTGAT CTTCCAGCGC
CACTTCCTGC GGTCCATGGC CCGTGTCGGC CTCCGCTGA
 
Protein sequence
MSADAARYAP RPSLVKRQRR ERASWIGRGV VMSLLAIVFL IPFLWMVSSS LKQNLDIFEI 
PIRWIPNPVD WSNYVDVWTG ERSMVRYFSN STIVVVATII GELAVVTLAG YAFGQLRFKG
QNVLFIAFLA TSMVPAQLML VPRFMFFREL GLYDTLWALI LPGLASVFAT FLLRQHFASA
PRELGEAARI DGAGEGRIFW SIYLPMARPA LAALAILIFD STWNDYESAL IMITDEAKYT
VPLGLTRFMS EDGTVSMGPA MAGSVSSLIP VLVIFLIFQR HFLRSMARVG LR