| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4190 |
|---|
| Symbol | |
|---|
| ID | 7858118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4618515 |
|---|
| End bp | 4619261 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643868290 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_002884190 |
|---|
| Protein GI | 229822664 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAG AGCACGCAGT GATCCAGGTG GCGCTCGACC GCGCATCCCC CGTCCCGCTC
TACTTCCAGC TCGCGGAACA GCTCACCTCG GCGATCACCG ACGGTCACGC TCAGCCTGGC
GACCCGTTCG AGAACGAGGT CGCCATGAGC GAGCGACTGG GACTCTCGCG CCCCACGGTG
CGGCGCGCGA TCCACCACCT GGTCGACCAG GGGCTCCTGG TGCGCAAGCG CGGCCTCGGC
ACGTTCGTCG CCAGCCGGCG GGTGCACCGC CGGGTGAGCA AGGGGAGCCT GTACGAGGAC
CTCTCGATCC AGGGCCGCCA TCCCAGCACC GAGGTGCTGA AGGTGGCGAG CGAGCAGTAC
CCGAAGGCGG CGACGGCGCT CGAGCTCGAT CCCGGTACCG AGCTCCTCGC ACTGAGGCGG
CTGCGGTTCG CCGACGGCGA GCCGTTGGCG ATCATGCAGA ACTGGCTCCC CCCGCGGCAC
AGCTCGATCA CGCAGGAGCA GCTCGAAGCC CGAGGCCTGT ACGCCGTCCT GCGCGACCAC
GGCGTCGGGT CGGTCGTCGC GCACCAGTCC GTCTCCGCAC GGCTCCCCAC CGCCGAGGAG
CGCGCGCTGC TCAAGATCTC GAGCCGGCTT CCGGTCATCG CCGTGTCGAG GACCGCGTTC
GACCCGTCCG GCGCCCCGGT CGAGCACGCC GAGCACGTCT ATCGTTCGGA CGGCTACACG
ATCGACCTGG TGCTCGAGGA GAACTGA
|
|---|
| Protein sequence | MAEEHAVIQV ALDRASPVPL YFQLAEQLTS AITDGHAQPG DPFENEVAMS ERLGLSRPTV
RRAIHHLVDQ GLLVRKRGLG TFVASRRVHR RVSKGSLYED LSIQGRHPST EVLKVASEQY
PKAATALELD PGTELLALRR LRFADGEPLA IMQNWLPPRH SSITQEQLEA RGLYAVLRDH
GVGSVVAHQS VSARLPTAEE RALLKISSRL PVIAVSRTAF DPSGAPVEHA EHVYRSDGYT
IDLVLEEN
|
|---|
| |