Gene Bcav_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4123 
Symbol 
ID7861509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4556066 
End bp4557784 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content75% 
IMG OID643868225 
ProductHNH nuclease 
Protein accessionYP_002884125 
Protein GI229822599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.621245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAG GCGCCGCGTT CGAGCCGCCG GACGAAGCCG CGTCCATGGC GCGCGGGGCC 
ACCGGTGCGG TGCGGGAGGT CTCTGCGGAA ACGACCGCCC TGATCTCGCG AGTGCGAGGA
ATGGCGGGCT CGTTCGATGC CGACCGGAAC GGGTGGGACG TCGAGACGGC GTTGGATGCC
GCGGCTGTGG TCGAGGATCT CGCCCGGACG GTGTCGCATC TGCAGCTCGT CGCGGCTCAT
GCGGTGGCGA CGTCGCACGA GCGCCCGGCG GCGGATCCCG GAGCGTGCCG ACTGGATGGC
AACGACGGCG CGCCGCTCTC GTTCGGCGCC TCGGCCCACC TGTCGCTCGT CCGTCCGAGC
GACGACGCCA CCGGCGCCGC GGGCCCCGCG CGGGAGACGC CGGCGCGGCG TCAGCGGTCG
CCCTACCGGC GGGCGGCCGA CGGGTTGCGG GTGCGGTTGC GTCTGTCGCA GGCGGAGGCG
CGGCGGCGGG TCGTCACGGC GCGGGATGTC CTCGGGTCCC GGACGATGTC GGGGGTGCCG
TTGGCACCGG AGTTCCCGCT CGTCGGCGAG CTGCTCGCCG ACGGCGCCGG AGACCGGGAC
GCCGTCCGGC ACATCCTGCA CGGCATGCAC GACATCGGCC GGGCGGTCCG CCACCGGCAC
CGGACCGACG TCCACCGCGC GTCCGCGGAC GCCGACCAGC CCGGCAACGA CGGCTCATCC
GAGGCCCTGG CCCGTCGTGA ACAGGCCGAC GCGACAGCTG CCGAGGAGGT CACCGAGGCC
GAGCGCATCC TGACCACCGC CGCCCGCGAG GTGGACGCCG ACAGCGTCCG CCGCCTCGTC
GACCGTGTCG TGCACCTCGT CGACCAGGAC GGCGCACCGC CGAGCGAGGC CGAGCTGTCC
GCCCTCCAGG GCGTGTTCTG GATGGGCCGC CGCCACGGCC TGCACCAGGT GCGGCTCTGC
GTCGACGACG TCGGGCGCGA GATGCTCGAG ACCATCTTCG CCACCGCCAC CAACCCCCGC
ACCTACGCCA ACCACGGCTG CGACAACACG ACCGACGCCG ACCCGGGCGC CGAACGCGGG
GCCGTAGTGC CCACGCCCGG CTCGGCATCC GCAGCCGACG TGACGCCGGT GGAGCGGCGC
CCCGTCGCTC GCCTCCGGCT CGACGCACTC CTCGCCGCAT GCGGCGCCGC GCTGCGCGCC
AGGGCCCTGC CCGACACCGG CGGACTCCCC ACCCAGGTCA TGGTCACCAT CGCCCTGAAC
GACCTCCGCG CCGGCATCGG CTCCGCCGAG CTCCCCTACA CCGGCCCGGT CCCAGCACGC
GACGCCCGCC GCCTCGCCTG CGACGCCGAC GTCATCCCCA TCGTGCTCGG CAGCGCCGGA
CAGATCCTCG ACGTCGGACG CTCGAAACGG CTCTTCCCCG CCCACCACCG CAAAGCCCTC
ACCGCCCGCG ACGGCGGCTG CGCGTTCCCC GGCTGCCACA TCCCCGCCCC CTGGTGCGAG
GGGCACCACG TCACCCCCTG GTGGAAGGGC GGAACCACCC GCATCGACCA CGCCACCCTG
CTCTGCGCCT ACCACCACCA CCTCATCCAC GCCGGCCGCT GGACCGTGCA GATGCGCAAC
GGCACACCGC ACTTCTACGG TCCCGGGCAG GCGACGAACG GCCCCGGGAT GCGCAACACC
TACCACCGGC TCGCCGTACC CAGGCGGCGC CGGCAATAG
 
Protein sequence
MTSGAAFEPP DEAASMARGA TGAVREVSAE TTALISRVRG MAGSFDADRN GWDVETALDA 
AAVVEDLART VSHLQLVAAH AVATSHERPA ADPGACRLDG NDGAPLSFGA SAHLSLVRPS
DDATGAAGPA RETPARRQRS PYRRAADGLR VRLRLSQAEA RRRVVTARDV LGSRTMSGVP
LAPEFPLVGE LLADGAGDRD AVRHILHGMH DIGRAVRHRH RTDVHRASAD ADQPGNDGSS
EALARREQAD ATAAEEVTEA ERILTTAARE VDADSVRRLV DRVVHLVDQD GAPPSEAELS
ALQGVFWMGR RHGLHQVRLC VDDVGREMLE TIFATATNPR TYANHGCDNT TDADPGAERG
AVVPTPGSAS AADVTPVERR PVARLRLDAL LAACGAALRA RALPDTGGLP TQVMVTIALN
DLRAGIGSAE LPYTGPVPAR DARRLACDAD VIPIVLGSAG QILDVGRSKR LFPAHHRKAL
TARDGGCAFP GCHIPAPWCE GHHVTPWWKG GTTRIDHATL LCAYHHHLIH AGRWTVQMRN
GTPHFYGPGQ ATNGPGMRNT YHRLAVPRRR RQ