Gene Bcav_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4087 
Symbol 
ID7861473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4517341 
End bp4518423 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content75% 
IMG OID643868190 
ProductGlu/Leu/Phe/Val dehydrogenase dimerisation region 
Protein accessionYP_002884090 
Protein GI229822564 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.733748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTG CCCTGCCCCT GCCCGATCTC GTCCACGAGC GCGTGGAGGT GGTGACGGGC 
CGGCGCAGCG GCCTGTTCGT CGCCGTCGCC CTCCACTCGT CGGTCCTCGG CTCCGCCCTC
GGCGGCGCCC GGCTGTGGAC GTACCCGCAC TGGAGCGACG CACTCGGCGA CGCCCTGCGG
CTGTCCGCAG CGATGACCCT GAAGAACGCC GTGGCCGGGC TCGACGCCGG CGGCGGGAAG
AGCGTGATCG GACTCGAGCC CGGCGTCGTG CTCGACGCCG ATCGCCGCCG TGCCGCGTTC
CTCGACCTGG GCGACGCCGT CGAGTCCTTG CACGGGCTGT ACCGCACGGC CGAGGACGTG
GGGTCGACGA CGCAGGACAT GCTCGTGGTC AGCGAGCGCA CCGAGCACGT GGTCGGGCTG
CCCGACGCCG TCGGCGGCGC GGGCGAGCCC GCAGGGCCGA CGAGCCTCGG CGTCCTCGCC
GCGATCCACG CGACTCTCGA ACGCGTGACC GGCTCACCGG ACCCGGCCGG CCGGCGCATC
ACGATCGCCG GCGTCGGGCA GGTGGGCGGC CGGCTCGCGG AGCGGCTCGC GGCGGAGGGC
GCCACGCTCA CGCTGACGGA CGTGAACCCG GCGAAGCGCG TCCTCGCGGA GTCGCTCGGT
GCCGCGTGGG TGGAGCCCGG GACCGAGCAC CTCGTGCGGG CTGACGTGTT CGTGCCCGCG
GGCGTGGGCG GTCTCCTCAC GGACGACGTC ATCGACACCC TCGACGCGTC GGCCGTGTGC
GGTCCCGCGA ACAACCCGCT GGCGTCGCAC GACGGCGCGG ATCGGCTCGC CGCGCGCGGG
ATCCTCTACG CGCCGGACTT CGTGGTCAAC GCCGGAGGCG TCATCTACCT GGACCTCGAG
TCGAAGAGGC TCGGCACGCA CGAAGAGATC CTGGACCGGG TCCGGCGGAT CGGCGACGTC
CTGCGCCGCC TGCTCGACGA CGCCGACCGC CTCGGCGTGA CGCCGCTCGA GGCGGCGGAG
CGGCTCGCGG CCGAGCGCCT CGACGCCGGC GGCCGCGTCG CCGTCAGCTC GCCCGGGGCG
TGA
 
Protein sequence
MTTALPLPDL VHERVEVVTG RRSGLFVAVA LHSSVLGSAL GGARLWTYPH WSDALGDALR 
LSAAMTLKNA VAGLDAGGGK SVIGLEPGVV LDADRRRAAF LDLGDAVESL HGLYRTAEDV
GSTTQDMLVV SERTEHVVGL PDAVGGAGEP AGPTSLGVLA AIHATLERVT GSPDPAGRRI
TIAGVGQVGG RLAERLAAEG ATLTLTDVNP AKRVLAESLG AAWVEPGTEH LVRADVFVPA
GVGGLLTDDV IDTLDASAVC GPANNPLASH DGADRLAARG ILYAPDFVVN AGGVIYLDLE
SKRLGTHEEI LDRVRRIGDV LRRLLDDADR LGVTPLEAAE RLAAERLDAG GRVAVSSPGA